Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2937g00011 ATGGCTGATAGCGTAGTTAGTTTTGTGCTGGAAAACTTGTCTCGGCTTGCGGCGCACGAAGCCAATTTGCTATGTGGCGTGGAGGACAAAGTGAAGCTCCTTGAGAGTCAGCTCAGAATGATGACTGTCTTTCTTAAGAACAGCGACCAAAACACACGGAAGAAGGAGATCGAACAAGAGGTTGTGCGTCAAATCACAGACATCGCACATGAAGCTGAGGATGTCATCGACACCTATGTTGCCAATGTTGCCCGCAACCAAAGGAGAAGTTGGGTGTCCAAGATGCTCCATGGTGTAGACCATGCAAAGCTGCTGCACCACGTGGCAGAGAGAATAGACAACATTAAAGTCAGAATTGACCAGATTTATGAGAACAGAATCAAATTCGACACCCAGGAAGCGGCAGGATCTTCAACAGATCAGGAGTTACAACTACTACACAAGCGAAGAAGGGACGTGGAAGAAGATGACGTGGTGGGTTTTCAGCATGGCACTACTGAAGTAATCAATCTCCTAGAGCAAGGGGGTCTACGTCGCAATGTGGTGTCCATCGTAGGTATGGGCGGATTGGGTAAAACTACTCTTGCTCGCAAGATTTATAACAGTGATTATGTTAAGAATCGCTTCCATTGTCATGCTTGGGTTTATGTGTCTAATGACTATAGACCTAAAGAGCTTTTGCTTGCTCTTCTTAAATGCTTGATGACAATCTCTGCAAATACTTGTTATGATAATAACAATAGCAGTCGCAAGCATAAGACAAAATCAAAGGGAAAAGGCAAAGCTGAATCTGATGATTTTTATAGTTTGAGTGAGGAAGAATTGAGAGGCAAGGTACAACACTGTTTGAAAGAGAAGAGGTATCTTGTAGTGTTAGATGACATATGGAAACCTCAACATTGGGATGACCTGCAAGATGCCTTCCCAGATGATAATAAAAGCAGTAGAATCTTGATCACCAGTCGTTTGAAAGAGGTGGCTTCTCATGCCAGCTCATCTCCTCCTTACTATCTCCCTTTTCTTAATCAGGAAGAAAGTTGGGAGCTTTTCTCAAAGAGGGTGTTTCGAGGAGAATGTGTGCCTTCTAATCTAGAGTTACTAGGTAAGCAAATGGCAGAAAGTTGTGGTGGCTTGCCACTGTCCATTGTGGTACTTGCAGGGATTCTGGCAAACAAGGAGAAGTCATACCGGGAATGGTCCAAGATCATCGGCCATGTCAACTCATATCTCACTCAACCAGAAACACAAGTACAAGATATAGTGCTTAAACTTAGTTATGATAGCTTGCCTCCAAAATTGAGGCCGTGCTTTCTATATTTTGGCATGTTTCCTGAAGATCATGAGATTCCTGTTAGACACTTAATCCGGTTATGGGTTGCTGAAGGATTCATTCTTCACAGTGATTTCAGAATTACAGAGGATGTTGCAGAGGACTACTTGGATGAGCTCATTGATCGTAGCTTAATTCAAGTGGGAAGAAGGAGAAGTGACGGGGGAATCAAGACATGTCGCATCCATGATTTGCTAAGAGATCTTTGCATATCTGAGAGCGGGGAGGAGAAGAAGTCTTTGAAGTTTGCAGGGATGTGA 1590 0.4352 MADSVVSFVLENLSRLAAHEANLLCGVEDKVKLLESQLRMMTVFLKNSDQNTRKKEIEQEVVRQITDIAHEAEDVIDTYVANVARNQRRSWVSKMLHGVDHAKLLHHVAERIDNIKVRIDQIYENRIKFDTQEAAGSSTDQELQLLHKRRRDVEEDDVVGFQHGTTEVINLLEQGGLRRNVVSIVGMGGLGKTTLARKIYNSDYVKNRFHCHAWVYVSNDYRPKELLLALLKCLMTISANTCYDNNNSSRKHKTKSKGKGKAESDDFYSLSEEELRGKVQHCLKEKRYLVVLDDIWKPQHWDDLQDAFPDDNKSSRILITSRLKEVASHASSSPPYYLPFLNQEESWELFSKRVFRGECVPSNLELLGKQMAESCGGLPLSIVVLAGILANKEKSYREWSKIIGHVNSYLTQPETQVQDIVLKLSYDSLPPKLRPCFLYFGMFPEDHEIPVRHLIRLWVAEGFILHSDFRITEDVAEDYLDELIDRSLIQVGRRRSDGGIKTCRIHDLLRDLCISESGEEKKSLKFAGM 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2937g00011 529 PANTHER DISEASE RESISTANCE PROTEIN RP 34 520 IPR044974 GO:0006952
Pral2937g00011 529 PRINTS Disease resistance protein signature 181 196 - -
Pral2937g00011 529 PRINTS Disease resistance protein signature 375 389 - -
Pral2937g00011 529 CDD RX-CC_like 2 122 IPR038005 -
Pral2937g00011 529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 440 IPR027417 -
Pral2937g00011 529 Gene3D - 5 118 - -
Pral2937g00011 529 Gene3D - 426 516 IPR036388 -
Pral2937g00011 529 FunFam Probable disease resistance protein At1g63360 426 515 - -
Pral2937g00011 529 Pfam NB-ARC domain 168 426 IPR002182 GO:0043531
Pral2937g00011 529 Gene3D - 137 334 IPR027417 -
Pral2937g00011 529 Pfam Rx N-terminal domain 5 90 IPR041118 -
Pral2937g00011 529 Gene3D - 340 425 IPR042197 -
Pral2937g00011 529 FunFam Probable disease resistance protein At1g61300 141 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2937g00011 Pral-Chr2937 108352 109941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2937g00011 159 512 WRKY Transcription Factor Family AT5G45050 24.294 2.38e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2937g00011 - - pcin:129285390 828.165