Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2937g00007 ATGTCTGATAGCGTAGTTAGTTTTGTGCTGGAAAACTTGTCTCGGCTTGTAGCACACGAAGCCAATTTGCTATGTGGCGTGGAGGACAAAGTGAAGCTCCTTGAGAGTGAGCTCAGAATGATGAGTGTCCACCTTAAGAACAGCGACCAAAACCAACGGAAGAAGGAGATCGAACAAGAGGTTGTGCGTCAAATCACAGACATCGCACATGAAGCTGAGGATGTCATCGATTCCTTTGTTGCCAACGTTGCTCGCAACCGAAGGAGAAGTTGGGTGTCCAAGATGCTCCATGGCGTAGACCATGCAAAGCTGCTACACCATGTGGCAGAGAAAATAGACAACATTAAACGAAGAAGGGATGTGGAGGAAGATGACGTGGTGGGTTTTCAGCATGACACAACTGAAGTAATCAATCTCCTCGAGCAAGAGGGTCTGCGTCGCAATGTGGTGTCCATCTTTGGTGTGGGCGGATTAGGTAAAACTACTCTTGTTCGCAAGATTTATAGCAGTGCTTATGTCAAGAATCACTTTGATTGTAATGCTTGGGTTTATGTGTCTAATAACTATAGACCTAGAGAGCTTTTGCATAACCTTCTTAAATGCTTGATGACAATCCTTGGAAAGGCATGCAAAAGCAAAGCTGAATCTGTTGATTTTTATAATTTGAATGAGGAAGAACTGAAAGGCAAGGTACGAGAGTGTTTAAAAGGGAAGAGGTATCTTGTAGTGTTGGATGACGTATGGCAAACTCAACATTGGGATGACCTGCGATATGCTTTCTCAGATGATAATAAAAGCAGTAGGATTTTGATTACTAGTCGTCTGAAAGAGGTGGCTTCTCATGCCAGCTCATTTCCTCCCTGCTCTCTCCCTTTTCTTAATGAAGAAGATAGTTGGGAGCTTTTCTCAGAGAGGGTGTTTCGAGGAAAGGATGTGCCTTCTAATCTCAAGCTACTAGGTAAGCGTATGGTAAAAAGTTGTGGTGGCTTGCCAATATCCATTATGGTCCTTGGAAGAATTCTAGCAAATAAGGATAAGTCATATCGAGAGTGGTCCAAGATCATGAGACATGTCAACTCGTATCTCACTCAACCAAAAACACAAGTACAAGACATAGTACTTAAGCTCAGTTATGACAGCTTGCCTTCAAGAGTGAGGCCATGCTTTTTATATTTTGGTATTTTTCCTGAAGACTACGAGATTCCTGTTAGAAGATTGATCCAATTATGGGTAGCTGAAGGATTCATTCTTCATAGCGATTCTAGAGTTAGAGAGGATGTTGCAGAGGACTACTTGGATGAGCTCATTGATCGTAACTTAATCCAAGTAAGAAGAAGGAGAAATGATGGGGGAATCAAGACATGTTGCATCCATGATTTGTTAAGAGAACTTTGCATATCTGAGAGTAGGTAG 1413 0.4225 MSDSVVSFVLENLSRLVAHEANLLCGVEDKVKLLESELRMMSVHLKNSDQNQRKKEIEQEVVRQITDIAHEAEDVIDSFVANVARNRRRSWVSKMLHGVDHAKLLHHVAEKIDNIKRRRDVEEDDVVGFQHDTTEVINLLEQEGLRRNVVSIFGVGGLGKTTLVRKIYSSAYVKNHFDCNAWVYVSNNYRPRELLHNLLKCLMTILGKACKSKAESVDFYNLNEEELKGKVRECLKGKRYLVVLDDVWQTQHWDDLRYAFSDDNKSSRILITSRLKEVASHASSFPPCSLPFLNEEDSWELFSERVFRGKDVPSNLKLLGKRMVKSCGGLPISIMVLGRILANKDKSYREWSKIMRHVNSYLTQPKTQVQDIVLKLSYDSLPSRVRPCFLYFGIFPEDYEIPVRRLIQLWVAEGFILHSDSRVREDVAEDYLDELIDRNLIQVRRRRNDGGIKTCCIHDLLRELCISESR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2937g00007 470 Gene3D - 292 377 IPR042197 -
Pral2937g00007 470 Gene3D - 106 284 IPR027417 -
Pral2937g00007 470 PANTHER DISEASE RESISTANCE PROTEIN RP 34 467 IPR044974 GO:0006952
Pral2937g00007 470 Pfam Rx N-terminal domain 5 89 IPR041118 -
Pral2937g00007 470 PRINTS Disease resistance protein signature 234 248 - -
Pral2937g00007 470 PRINTS Disease resistance protein signature 327 341 - -
Pral2937g00007 470 PRINTS Disease resistance protein signature 149 164 - -
Pral2937g00007 470 FunFam Probable disease resistance protein At1g61300 108 284 - -
Pral2937g00007 470 FunFam Probable disease resistance protein At1g63360 378 467 - -
Pral2937g00007 470 CDD RX-CC_like 2 118 IPR038005 -
Pral2937g00007 470 Pfam NB-ARC domain 135 377 IPR002182 GO:0043531
Pral2937g00007 470 Gene3D - 378 468 IPR036388 -
Pral2937g00007 470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 392 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2937g00007 Pral-Chr2937 64801 66357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2937g00007 127 446 WRKY Transcription Factor Family AT5G45050 24.138 6.26e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2937g00007 - - pcin:129285390 728.013