Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2937g00006 ATGGCTGATACCGTAGTTAGCTTCGTGCTGGAAAACTTGTCTCGGCTTGTGGCACATGAAGCCAATTTGCTATGTGGCGTGGAGGACAAAGTGAAGCTCCTTGAGAGTCAACTCAGAATGATGACTGTCTTCCTTAAGAACAGTGACCAAAACCAACGGAAGAAAGAGATCGAACAAGAGGTTGTGCGTCAAATCACAGACATCGCACATGAAGCTGAGGATGTCATTGACACCTTTGTTGCCAACGTTGCTCGCAACCAAAGGAGAAATTGGGTGTCCAAGATGCTCCACGGTGTAGACCATGCAAAGCTGCTGCACCATGTGGCAGAGAAAATAGACACCATTAAAGTCAGAATCGACCAGATTTATGAAAACAGAATCAAATTCGACACCCAGGAAGCGGCAGGATCTTCAATAGATCAGGAGTTACAACTGCTACACAAGCGAAGAAGGGACGTGGAAGAAGATGACGTGGTGGGTTTTCAGCATGACACAATTGAAGTAATCAATCTCCTAGAGCAAGGGGGTCTTCGTCGCAATGTGGTGTCCATCATAGGTATGGGCGGATTAGGTAAAACTACTCTTGCTCGCAAGATTTATAAGGGTGCTTATGTTAAGAATCACTTTTATTGTCATGCTTGGGTTTATGTGTCTAATGACTATAGACCTAGAGAGCTTTTGCAGACCCTTCTCAAATGCTTGCTGAAAATCTCTGTAAATGCTTGTTATCACAATTACAATAGCAGTAGCAAGAATAAGAAAAAATCAAAGGGTAAACGCAAAGTTGAATATGATGAATTTTATAATTTAAGTGAGGAAGAATTGAGAGACAAAGTATATGACTGTTTGAAAGGGAAGAGATATCTTGTAGTGTTGGATGACGTGTGGAAACCTCAACATTGGGATGACCTACAAGATGCTTTTCCAGATGATAATAAAAGCAGTAGAATCCTGATTACTAGTCGTTTGAAAGAGGTAGCTTCTCATGCCAACTCATCTCCTCCTTACTATCTCCCTTTTCTTAATCAAGAAGACAGTTGGGAGCTTTTCTCAAAGAGGGTGTTTCGAGGAGAATATGTGCCTTCTGATCTAGAGTTACTAGGTAAGCGAATGGTAGAAAGTTGTGGGGGCTTGCCAATATCCATTGTGGTACTCGCGGGAATTCTAGCAAACAAGGAGAAGTCATATTGGGAATGGTCTAAGATCATGGGCCATGTAAACTCATATCTCACTCAACCAGAAACACAAGTACAAGATATAATACTTAAACTTAGTTATGATAGCTTGCCTCCAAAATTGAGGCCGTGCTTTCTATATTTTGGTATATTTCCTGAAGACTATGAGATTCCTGTTAGACACTTAATCCAGTTATGGGTTGCTGAAGGATTTATTCTTCACAGTGATTCTAGAATTGCAGAGGATGTTGCTCAGGACTATTTAGATGAGCTCATTGATCGTAGCTTAATCCAAGTAGGAAGAAGGAGAAGTGATGGGGGGATCAAGACATGTCGCATCCATGATTTACTAAGAGAACTTTGCATGTCTAAGAGCAGGGAGGAGAAGGTTTTTGAAGTTTGTAGGGACATAGACATTTTGGAGCAAACCAAACCTCGCAGGCTATCCATTCAATGTAATATGTCTGATTATTTTGCTTCGAGCAACAAAGACCATTCAGGCACTCGGTCCATGCTCTGCATGGACCGGGACTCCTACTACTTCCTTGATTCCAACAAGTCAAAAAGGCTTGTGAAATGGTTTCACCTTGTTCGAGTGTTGGATCTAGGAGTTCCAGTGTCTTGTCAGTTTAAGATCCCTACCGATTTAAACAAGTTAGTGCATCTAAGGTACTTAAGAATAGACCTGCAAACAAGCTTTTGTAAAGAAGTTGTTAGAGTGATTCCTGAATTCATGTGTAATCTATGGAATCTAGAAACTTTGGACCTGGGGCATTCTGTATGTTTAATACATGCAACCTTCTCCAGCGGAATGTGGAAGCTCAAGAGACTGAGGCATCTTCATACTGCCGGACCTATGATTTTACCTAAGTTTCCAAATGTAGAAAGTAATACCATGTGGAATCTACAAACCTTATCCTATGTTGCTGTAAACAAAAAATCAGCCGCCATGTCTCTAATAAGTAAAGGTGTATTTCCAAAGCTTAGGAAGTTGGGTTTGCATTTTTGTGAAGATGACAAGCATAAACAAGGAGTTGGCCATTTCTGGGAATACCTTCCAAACCTAAAGCATCTGAATACGTTGAAGATCTATGGCTTTGCTGATATTCCAACATCTGTCAATGCCTTTCCTTCCAACCTTACGAAGCTTGCAGTCTCAACTCTGAACTTAAACAGCGATGTCATGAGCACTTTGGGGAGTCTTACCAACCTCAGAACTTTGAAACTAAGAGATTGTGAATTTCCAAAAGAACCATGGTCTAAATCAGAGCTTTGTTGCATTAATGGGTTCCCCCAACTAGAGGTATTTCAAATGAAAGGTTTGTGGAAGCTCTCTCGCTGGGAATTAGGTAAAGATGTAATGCCTTGTCTCAGACGTTTGGTCATTGAAAATTGCTGGCTGTTCACTTCTCTCCCTAACGAGCTTTGGTCCTTGACTTCCTTACGAGAGGTACAAGTAATACAGCCCTCTAAATCATTGGAGATGCAGCTCCAAAGTCAACCCATGCGAGAAGGGTGCAATCTCACTATCTCTAAAGGGTATCATATATGTGTTACTGTTGGGAGACAGAGAGAGAATGAGTGA 2760 0.413 MADTVVSFVLENLSRLVAHEANLLCGVEDKVKLLESQLRMMTVFLKNSDQNQRKKEIEQEVVRQITDIAHEAEDVIDTFVANVARNQRRNWVSKMLHGVDHAKLLHHVAEKIDTIKVRIDQIYENRIKFDTQEAAGSSIDQELQLLHKRRRDVEEDDVVGFQHDTIEVINLLEQGGLRRNVVSIIGMGGLGKTTLARKIYKGAYVKNHFYCHAWVYVSNDYRPRELLQTLLKCLLKISVNACYHNYNSSSKNKKKSKGKRKVEYDEFYNLSEEELRDKVYDCLKGKRYLVVLDDVWKPQHWDDLQDAFPDDNKSSRILITSRLKEVASHANSSPPYYLPFLNQEDSWELFSKRVFRGEYVPSDLELLGKRMVESCGGLPISIVVLAGILANKEKSYWEWSKIMGHVNSYLTQPETQVQDIILKLSYDSLPPKLRPCFLYFGIFPEDYEIPVRHLIQLWVAEGFILHSDSRIAEDVAQDYLDELIDRSLIQVGRRRSDGGIKTCRIHDLLRELCMSKSREEKVFEVCRDIDILEQTKPRRLSIQCNMSDYFASSNKDHSGTRSMLCMDRDSYYFLDSNKSKRLVKWFHLVRVLDLGVPVSCQFKIPTDLNKLVHLRYLRIDLQTSFCKEVVRVIPEFMCNLWNLETLDLGHSVCLIHATFSSGMWKLKRLRHLHTAGPMILPKFPNVESNTMWNLQTLSYVAVNKKSAAMSLISKGVFPKLRKLGLHFCEDDKHKQGVGHFWEYLPNLKHLNTLKIYGFADIPTSVNAFPSNLTKLAVSTLNLNSDVMSTLGSLTNLRTLKLRDCEFPKEPWSKSELCCINGFPQLEVFQMKGLWKLSRWELGKDVMPCLRRLVIENCWLFTSLPNELWSLTSLREVQVIQPSKSLEMQLQSQPMREGCNLTISKGYHICVTVGRQRENE 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2937g00006 919 Gene3D - 5 118 - -
Pral2937g00006 919 Gene3D Ribonuclease Inhibitor 568 901 IPR032675 -
Pral2937g00006 919 Gene3D - 340 425 IPR042197 -
Pral2937g00006 919 Pfam NB-ARC domain 169 427 IPR002182 GO:0043531
Pral2937g00006 919 FunFam Probable disease resistance protein At1g63360 426 515 - -
Pral2937g00006 919 PRINTS Disease resistance protein signature 181 196 - -
Pral2937g00006 919 PRINTS Disease resistance protein signature 638 654 - -
Pral2937g00006 919 PRINTS Disease resistance protein signature 375 389 - -
Pral2937g00006 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 440 IPR027417 -
Pral2937g00006 919 PANTHER DISEASE RESISTANCE PROTEIN RP 34 857 IPR044974 GO:0006952
Pral2937g00006 919 CDD RX-CC_like 2 122 IPR038005 -
Pral2937g00006 919 SUPERFAMILY L domain-like 504 877 - -
Pral2937g00006 919 Pfam Rx N-terminal domain 5 89 IPR041118 -
Pral2937g00006 919 Gene3D - 426 517 IPR036388 -
Pral2937g00006 919 FunFam Probable disease resistance protein At1g61300 141 334 - -
Pral2937g00006 919 Gene3D - 138 333 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2937g00006 Pral-Chr2937 57624 60383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2937g00006 159 512 WRKY Transcription Factor Family AT5G45050 23.446 1.27e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2937g00006 - - pcin:129285390 1275.77