Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2936g00005 ATGGTTTGGTTTCAATGCGAGGATTGTGGTGACAATCTGAAGAAACCCAAGTTACCGAATCATTTCAGAACTTGTTCCGCTTCTAAGTTGTCATGCATCGATTGTGGAGAAATATTTGGGCAAGACACCGTTCAGCAGCACACACAATGTATTACGGAAATGGAAAAGTATGGTCCAAAAGGCCAAGGCAAAACTTTGAATGTTACAACTGCCAAATCTAACAATAATAACAAGCAAAAGCCTGAAGTTGATATTCATGTTGGGTTAGCAGAAAGACCTCCGTGGTTTTGTAGCCTCTGCAACACAAGAGCTACGAGTAAGCAAACACTTCTTCTCCATGCTGATGGAAAGAAACACAGGGCAAAAGCTCGGGCATTCCATGCTGCAAAGCAACAACCAACTCAGATGGACGCATCTTCTCCGGATGCAAAGCTTCCAGTGGAGCAAGCTTCCAATGATAAGGTCCAACTCAACAATAATGGACAGCAGACAAAATTGCAAGATCCATCTGAACACAATAACTTGAAATCGGGGAATGAAATCTCTCAATCAAATAAAAAGAGGAAATCTGATGTGGCGGAGGATGACCCTAACAGGAAAAAGGGCAGGGATGACAATTCAGGTGAGTTGGGAAATGGGGAAGTAGTTCAGGCTGAAGGAGCAGAGGCTGGGAGAAAAGAAGATCGTTTGAAGAAAGAAACGATGGTTAATGACAAGAAGAACATAAAGTGGAAGAAGTTTATCAAATCAGCGTTGAAATCTCATCCTGATGGAAAATTGAAGATGAAGAAGTTGAGAAAACATGTCTTGAAAGCCTTGCAGGAATCTGGCGTTGAAGTTGATGAAACTGAACTTAGTGAGGCACTTGAGCATAAGATCAATTCGAGTTCCAGATTTGCAGTTGAGAAGAAGTATGTGCGGTTGGTGGCCAGGGATGGTGACTAG 945 0.4243 MVWFQCEDCGDNLKKPKLPNHFRTCSASKLSCIDCGEIFGQDTVQQHTQCITEMEKYGPKGQGKTLNVTTAKSNNNNKQKPEVDIHVGLAERPPWFCSLCNTRATSKQTLLLHADGKKHRAKARAFHAAKQQPTQMDASSPDAKLPVEQASNDKVQLNNNGQQTKLQDPSEHNNLKSGNEISQSNKKRKSDVAEDDPNRKKGRDDNSGELGNGEVVQAEGAEAGRKEDRLKKETMVNDKKNIKWKKFIKSALKSHPDGKLKMKKLRKHVLKALQESGVEVDETELSEALEHKINSSSRFAVEKKYVRLVARDGD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2936g00005 314 SUPERFAMILY beta-beta-alpha zinc fingers 84 129 IPR036236 -
Pral2936g00005 314 MobiDBLite consensus disorder prediction 121 144 - -
Pral2936g00005 314 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Pral2936g00005 314 MobiDBLite consensus disorder prediction 182 208 - -
Pral2936g00005 314 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Pral2936g00005 314 SMART ZnF_U1_5 92 126 IPR003604 GO:0003676|GO:0008270
Pral2936g00005 314 FunFam cell growth-regulating nucleolar protein-like 1 50 - -
Pral2936g00005 314 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Pral2936g00005 314 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Pral2936g00005 314 FunFam UBP1-associated proteins 1C 89 132 - -
Pral2936g00005 314 Gene3D - 1 50 - -
Pral2936g00005 314 Gene3D Classic Zinc Finger 90 133 - -
Pral2936g00005 314 MobiDBLite consensus disorder prediction 158 233 - -
Pral2936g00005 314 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Pral2936g00005 314 MobiDBLite consensus disorder prediction 158 181 - -
Pral2936g00005 314 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 309 IPR039999 GO:0003677
Pral2936g00005 314 Pfam Zinc-finger of C2H2 type 95 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2936g00005 Pral-Chr2936 99706 102807 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2936g00005 1 144 C2H2 Transcription Factor Family AT2G19380 40.394 4.57e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2936g00005 K15263 - gmx:100790272 426.787