Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2936g00003 ATGTCCATTAACCTAATCCCAGATAAAGATGAGGTCGAATACTTCTGGTGGAGAAACCTGGGATTCCTATCGAGTATCATTGGCCTGTTATCTTATCGTCTGAGTTCCTCTTTTCACTTTATGTTTGGAGAGATGAACACTTGGAAGACTCTTCTGTATATTTTTTTGAGTCTGATCTTTCCCTACAGTATCTTCTTCGTGAAGACATGGAAACCTCTCCAGAATTTATTGTTCAGATCTCACCTAGCATTCCTGGTCTTGCTCCTCTCCTCAATTTACTCTTATTTCTATGACAAATTCGTGAAGGAAAAGCCGGACATGTTCAGTCTCCTTTCTACTGGTTCATTTGCTTTGACGTCTTTAAGCTTGAAAAGGCAGAATATTCAACTTGGATTTGAGGATGATCTTCTCAAATTTTTCCTGGGTTTTCTCACCATCCAGCTCATGAAGATCAACTTGCTTCTCGCTTTGGTCGGAGCAGCTTTGTGTTACTTCGCCATCGTTCTAATTCCTTGGAGTTTAGGTTCTCCATTGGAGACTGTTAGTTGTATTACTGCCCTCCAAGAGAACGTGGCAATAAAAATTGATTGTCGTGTTTCCGATCTCCGAAAGCAATTGTGTTCCACTCAGCTGGGAATTGTGAATGACAGTGAAAATCCTGAGAGATTCGTTTACCCTTCAGATTTTGAGTCTAGACTCAAGGACGCAATCGCTTCTGGGTTAGTTCAAGAGTGTTACGACGCTTTCATCACTTGGCGAAAACAGTTCCTAAACGACCAGATGACTACTATGGGGTTTCAGAATCTCAGCATCAATGAAGTCCCCAGGTTGCCGATGAAAACCCTCAAAAACGACATCGAAGAATGGACAAAAGCTTGTCATTTGGTCGTTAAGAGGCTGTTTCCTCAGGAACGGCATGCCTGCAGTGTCGTCTTCTCGGCGCTCTCTCCTGGGGACGAACTGTCTTTCATGGAGGTTTGTCGGGGAATAATGGCACGGCTATTGAATTATGCCAAAGCCGTTCTGACCACAGCGCAGTCGCCGGAGCATTTGGTCACAATCGTCGTCGTTTTGGACACATTGGAGGAGATTTTGCCTGACATGGAATCGCTTTTCTGCAATAAGATTTGTGAGTTCCTCTACGATGAAGCTATCGCAGTGAGCAAAAGACTAGGAGAAGCAATCACAGGAGTCTTCATGGAGCTCGAGAATCTGATTGGTCAAGACCCGGCAAAAGTAAATACACACGAATCTCAATGCCTGATCTGCATTTACCAATTCTGA 1284 0.4369 MSINLIPDKDEVEYFWWRNLGFLSSIIGLLSYRLSSSFHFMFGEMNTWKTLLYIFLSLIFPYSIFFVKTWKPLQNLLFRSHLAFLVLLLSSIYSYFYDKFVKEKPDMFSLLSTGSFALTSLSLKRQNIQLGFEDDLLKFFLGFLTIQLMKINLLLALVGAALCYFAIVLIPWSLGSPLETVSCITALQENVAIKIDCRVSDLRKQLCSTQLGIVNDSENPERFVYPSDFESRLKDAIASGLVQECYDAFITWRKQFLNDQMTTMGFQNLSINEVPRLPMKTLKNDIEEWTKACHLVVKRLFPQERHACSVVFSALSPGDELSFMEVCRGIMARLLNYAKAVLTTAQSPEHLVTIVVVLDTLEEILPDMESLFCNKICEFLYDEAIAVSKRLGEAITGVFMELENLIGQDPAKVNTHESQCLICIYQF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2936g00003 427 PANTHER EXOCYST COMPLEX PROTEIN EXO70 228 413 IPR004140 GO:0000145|GO:0006887
Pral2936g00003 427 Pfam Exo70 exocyst complex subunit 288 412 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pral2936g00003 427 Gene3D Exocyst complex component Exo70 186 418 - -
Pral2936g00003 427 SUPERFAMILY Cullin repeat-like 224 413 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2936g00003 Pral-Chr2936 19247 20530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2936g00003 227 413 EXO70 exocyst subunit family AT5G58430 41.711 5.51e-48 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2936g00003 - - pcin:129304004 513.842