Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2935g00004 ATGGCCTCTCTTCTTCTTCAACCTCGTCATCATCGTCTTCGTCCTCTTCTTCCTTTACCGGTCTGTGTCATCTTCTTCCTCATTTTTCTTCTCTCCATTATCAATCCTTCTCACCAAGCTTCTTCTAATAATGTCACCGTCCCATTAAACCCTAGGCTGATCAAAGCTTACTATGCTCTTCAAGCATGGAAGCATTCCATCACCTCCGATCCCAAGAACTTCACCTCCAACTGGTACGGCTACCATGTCTGCAACTACAACGGCGTTTACTGTGCTCCAGCGCCGGATGATCCCCACATCTACACCGTCGCCGGCATCGACCTCAACCACGGCGACATCTCTGGTTCCTTGCCGGAAGACCTTGGTCAACTCACCGACCTTGCTCTCTTCCATCTCAACTCTAACCGGTTCTGTGGGACCCTCCCTCAGAGCTTCCGTAACCTTCATCTTCTTCATGAGCTTGACGTCAGTAACAACCAGTTGTCCGGGCCGTTCCCCGACGTCATTTTGTGTCTCCGTTCGTTGAAGTTCTTGGACATTAGGTTCAACTCTTTCGAAGGCACGGTCCCTTCTGGTCTCTTTGACCTTAAGCTCGACGCCGTTTTCATAAACGACAACAAGTTTCAGTTCTCGTTGCCGGAGAATCTCGGGAATTCTCCGGTGTCCGTTGTGGTCTTCGCCAACAATAATCTGAATGGGTGTGTTCCGTCGAGTCTGGGAAAAATGAAGGACACGCTTAATGAGATTATAATTTCCAACAGTGGGTTAAAGGGCTGTTTACCGGAGGAGATTGGTAAATTGGATCAAGTTACGGTGTTTGATGTGAGTTTTAACAAGTTAATCGGAACGTTGCCGGAATCTATTGAGGGAATGAAGAAATTGGAGCAGTTGAATGTGGCGCATAACGAGCTCTCCGGTGAGATTCCGGCGAGTGTGTGCTCGTTGCCGAGGTTACAGAACTTCACGTACTCCTATAACTACTTCTGCAGCGAACCGCCTACCTGTCTGAAGTTGCCGGCGAAAGATGATCGGAAAAATTGTATTCCTTACCGGCCGATGCAGAGGTCAGAAATGGAATGTAAAGCCTTTTATGCTCACCCAGTTGATTGTGGTGCCTTTGGATGCTCAAGGCCGCCACCACCGCCTCCTCCTCCATCACCTCCTCCGCCATCTCCTCCTCCTCCATCACCACCTCCGCCATCTCCTCCTCCTCCATCACCCCCTCCGCCCCCTCCACCCCCACCTCCTCCTCCTCCGCCCCCTCCGCCCCCACCTCCTCCACCTCCGCCGCCGCCACCGCCACCTCCTCCTCCGGCGGTTCACCATTATTATCCGTGA 1338 0.5179 MASLLLQPRHHRLRPLLPLPVCVIFFLIFLLSIINPSHQASSNNVTVPLNPRLIKAYYALQAWKHSITSDPKNFTSNWYGYHVCNYNGVYCAPAPDDPHIYTVAGIDLNHGDISGSLPEDLGQLTDLALFHLNSNRFCGTLPQSFRNLHLLHELDVSNNQLSGPFPDVILCLRSLKFLDIRFNSFEGTVPSGLFDLKLDAVFINDNKFQFSLPENLGNSPVSVVVFANNNLNGCVPSSLGKMKDTLNEIIISNSGLKGCLPEEIGKLDQVTVFDVSFNKLIGTLPESIEGMKKLEQLNVAHNELSGEIPASVCSLPRLQNFTYSYNYFCSEPPTCLKLPAKDDRKNCIPYRPMQRSEMECKAFYAHPVDCGAFGCSRPPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAVHHYYP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2935g00004 445 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 35 438 - -
Pral2935g00004 445 Gene3D Ribonuclease Inhibitor 220 347 IPR032675 -
Pral2935g00004 445 FunFam Leucine-rich repeat extensin-like protein 1 57 218 - -
Pral2935g00004 445 Pfam Leucine rich repeat 127 184 IPR001611 GO:0005515
Pral2935g00004 445 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 243 331 - -
Pral2935g00004 445 Pfam Leucine rich repeat N-terminal domain 58 91 IPR013210 -
Pral2935g00004 445 Gene3D Ribonuclease Inhibitor 56 219 IPR032675 -
Pral2935g00004 445 PRINTS Proline rich extensin signature 378 390 - -
Pral2935g00004 445 PRINTS Proline rich extensin signature 393 414 - -
Pral2935g00004 445 PRINTS Proline rich extensin signature 414 430 - -
Pral2935g00004 445 SUPERFAMILY L domain-like 57 339 - -
Pral2935g00004 445 MobiDBLite consensus disorder prediction 379 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2935g00004 Pral-Chr2935 29112 30548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2935g00004 50 383 Leucine-rich Repeat extension Gene Families AT3G22800 68.955 1.87e-162 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2935g00004 - - gmx:100813811 565.844