Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2935g00002 ATGTCAGCTGTCACCGGGAATCTAGATTTCTCAGGAGATTCTACTCATACATATCATAATTCAAGTGAGCTACAAGGAAATGCTGATCAAGGGATTTCCCTGGAAGATTCAACAATTGAGCCATCTAATGAGCACTCAGACTTTCCAATTGAGCTACCACAAACCTTAAAATATGATTGTGGTAGCCCGGCATGTGATCCTCCACCTGGTGGTGATGAGACAAATTCTCTTCTGGATTTGTCAAGTAAGGCAGCATCAGATGTTGCGTATGTTGATGAAGCCTGTAAAAAAAGTTCACCCGAGTCTGAAGTGCTACTTCCAGGAATATGTCAAGCTGAGCCAAGAATTGGAGGCCCAGAGTGTGACTGGGATGGTTTACTTTCAGATGCTACTGATCTATTAATTTTCAACTCTCCTAACGAAAGAGAAGCTTTAAAGGGTTTAATGCAAAAATCATTTGACCCCACAGGACGGTTTAGCAATTTTATGTCTCAGTTGCCACAAACTACCTTAAGTCATGGTGAGAGAATGCGAATTTTTGATCCAGCTACTTCTGGTTCAGAACATGAAACTGAAGATCATCCTTCTCAGCCAGAAGAAGTCATCGACAATGATCAGGCACAGGACAATCTTGCTAACGCTGCTGGGATGGGTGGTAATCCTGATAATACGTTGGATAATCAGCTTGTTTCAATAACACGCCATGGCATACGAAGGCGTTGTCTAGATTTTGAGATGGTTGGGGGAAGAAGGAAGAACTCCAATGATGGTTCAAATAACAGTAGTTCTAGCACATTACAATCTGATGAGAGAAATGTTGCTAATGATAAGCAGCTTCTTCCTGCAAAACGCAACGGTAATTCACAGAAGTGCATTTTGCCTGGAATTGGCTTACACCTGAATGCTCTTGCGAGTATAAAAGATTTCAAAAGCTTAAAAGTTGAAAATACATCTTCTGGAAGACAACTCAGCCTGCCAAGCCCTGCCTTGCAACAATCCTCTAGCCAAGAACATAGTCTAGCATTGGTGCCTTTATCAACCGAAGGAGATTCAGATCTGCCAGACAATGGGATTCAGCCTGCTGAAGATTGTTCCCAGCCCTCAGGATATGCCATTGATGAAGATTTCAACCAGAATAGCCCCAAAAAGAAAAGGCGTAAGTTGGAGCCAGCTGGGGATGGTGAATCTTGTAAGCGTTGTAATTGCAAGAAATCCAAGTGTTTGAAGCTCTACTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCTTGCTCTTGCCAGGATTGCTTCAACAAGCCTATTCATGAGGATACTGTTCTTGCAACTCGCAAGCAGATTGAGTCTCGTAATCCTCTAGCCTTTGCTCCTAAAGTCATTCGAAGCTCTGATTCTGTACCTGAAATTGGGGATGATCCCAACAAAACTCCAGCTTCTGCACGGCACAAAAGAGGATGTAACTGCAAGAAATCAAGCTGCTTAAAGAAATACTGTGAATGCTATCAGGGCGGTGTGGGTTGCTCCATTAGCTGTAGATGTGAGGGATGCAAGAATGCGTATGGTAGAAAGGATGGTTCCATTCCTATTGGAGTAGAGGCTGAGCCAGAAGAAGAAACAGAACCATCTGAGAAGGCTGTGACTGAAAAATCCTTACAAAAATCCGAGATCCAGAACAACGAAGAGCATCTGGAGTCCACACTTCCCACAACACCATTACGAATGTGCAGACCATTGCTTCCTCTATCCTTTTCATCAAAGGGAAAACCACCACGATCCTCTTTCATCACTACCATACCAGCTTCTGGATTGTACGCCAGCCAGAAACTTGGGAAACCCAGCATCCTTCGGTCTCAACCCAAGTTTGAAAAGCAGTTTAAACCCGTTTCCAATGACGAAATGCCGGAGGTTCTCCGGGGTGACGGGTCTCCTAGCATCAAGACATCATCTCCTAATGGCAAGAGGATCTCCTCTCCTAACTGTGACTTTGGGTCATCTCCCAGTCGCAGAAGTGGCAGGAAGTTGATATTACAATCCATCCCATCATTTCCTTCTCTCACTGCTCCTCACCTTTAG 2073 0.4409 MSAVTGNLDFSGDSTHTYHNSSELQGNADQGISLEDSTIEPSNEHSDFPIELPQTLKYDCGSPACDPPPGGDETNSLLDLSSKAASDVAYVDEACKKSSPESEVLLPGICQAEPRIGGPECDWDGLLSDATDLLIFNSPNEREALKGLMQKSFDPTGRFSNFMSQLPQTTLSHGERMRIFDPATSGSEHETEDHPSQPEEVIDNDQAQDNLANAAGMGGNPDNTLDNQLVSITRHGIRRRCLDFEMVGGRRKNSNDGSNNSSSSTLQSDERNVANDKQLLPAKRNGNSQKCILPGIGLHLNALASIKDFKSLKVENTSSGRQLSLPSPALQQSSSQEHSLALVPLSTEGDSDLPDNGIQPAEDCSQPSGYAIDEDFNQNSPKKKRRKLEPAGDGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAYGRKDGSIPIGVEAEPEEETEPSEKAVTEKSLQKSEIQNNEEHLESTLPTTPLRMCRPLLPLSFSSKGKPPRSSFITTIPASGLYASQKLGKPSILRSQPKFEKQFKPVSNDEMPEVLRGDGSPSIKTSSPNGKRISSPNCDFGSSPSRRSGRKLILQSIPSFPSLTAPHL 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2935g00002 690 MobiDBLite consensus disorder prediction 642 684 - -
Pral2935g00002 690 MobiDBLite consensus disorder prediction 1 52 - -
Pral2935g00002 690 MobiDBLite consensus disorder prediction 252 272 - -
Pral2935g00002 690 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 398 433 IPR005172 -
Pral2935g00002 690 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 484 519 IPR005172 -
Pral2935g00002 690 MobiDBLite consensus disorder prediction 1 39 - -
Pral2935g00002 690 MobiDBLite consensus disorder prediction 616 690 - -
Pral2935g00002 690 MobiDBLite consensus disorder prediction 540 560 - -
Pral2935g00002 690 SMART CXC_2 481 522 IPR033467 -
Pral2935g00002 690 SMART CXC_2 395 436 IPR033467 -
Pral2935g00002 690 MobiDBLite consensus disorder prediction 369 395 - -
Pral2935g00002 690 MobiDBLite consensus disorder prediction 533 569 - -
Pral2935g00002 690 MobiDBLite consensus disorder prediction 320 340 - -
Pral2935g00002 690 MobiDBLite consensus disorder prediction 248 272 - -
Pral2935g00002 690 ProSiteProfiles CRC domain profile. 396 521 IPR005172 -
Pral2935g00002 690 MobiDBLite consensus disorder prediction 377 395 - -
Pral2935g00002 690 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 20 686 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2935g00002 Pral-Chr2935 3873 8277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2935g00002 122 689 CPP Transcription Factor Family AT4G14770 49.228 6.03e-147 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pral2935g00002 TCR 2.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2935g00002 - - gmx:100804447 853.973