Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2935g00001 ATGGACACACCAGAGAGGAACCAGATCGGAACCCCCATCTCCAAATTTGAGGATTCACCCGTCTTCAACTTTATCAATAGTCTTTCTCCTATAAAGCCTGTTAAGTCTGTTCATAGTATTCAGACTATCAATTCACTCAGTTTTTCATCTCCTCCATCCGTGTTTACATCACCCCATGTCAGCTGTCACCGGGAATCTAGATTTCTCAGGAGGCATAACGTTATAGATGCATCAAAGCACAAGGTTTTGTCTGAAGATGGGAAAAAAATATGTTCAAGTGAAGAAGCTCTTGCAGATTCTACTCATACATATCATAATTCAAGTGAGCTACAAGGAAATGCTGATCAAGGGATTTCCCTGGAAGATTCAACAATTGAGCCATCTAATGAGCACTCAGACTTTCCAATTGAGCTACCACAAACCTTAAAATATGATTGTGGTAGCCCGGCATGTGATCCTCCACCTGGTGGTGATGAGACAAATTCTCTTCTGGATTTGTCAAGTAAGGCAGCATCAGATGTTGCGTATGTTGATGAAGCCTGTAAAAAAAGTTCACCCGAGTCTGAAGTGCTACTTCCAGGAATATGTCAAGCTGAGCCAAGAATTGGAGGCCCAGAGTGTGACTGGGATGGTTTACTTTCAGATGCTACTGATCTATTAATTTTCAACTCTCCTAACGAAAGAGAAGCTTTAAAGGGTTTAATGCAAAAATCATTTGACCCCACAGGACGGTTTAGCAATTTTATGTCTCAGTTGCCACAAACTACCTTAAGTCATGGTGAGAGAATGCGAATTTTTGATCCAGCTACTTCTGGTTCAGAACATGAAACTGAAGATCATCCTTCTCAGCCAGAAGAAGTCATCGACAATGATCAGGCACAGGACAATCTTGCTAACGCTGCTGGGATGGGTGGTAATCCTGATAATACGTTGGATAATCAGCTTGTTTCAATAACACGCCATGGCATACGAAGGCGTTGTCTAGATTTTGAGATGGTTGGGGGAAGAAGGAAGAACTCCAATGATGGTTCAAATAACAGTAGTTCTAGCACATTACAATCTGATGAGAGAAATGTTGCTAATGATAAGCAGCTTCTTCCTGCAAAACGCAACGGTAATTCACAGAAGTGCATTTTGCCTGGAATTGGCTTACACCTGAATGCTCTTGCGAGTATAAAAGATTTCAAAAGCTTAAAAGTTGAAAATACATCTTCTGGAAGACAACTCAGCCTGCCAAGCCCTGCCTTGCAACAATCCTCTAGCCAAGAACATAGTCTAGCATTGGTGCCTTTATCAACCGAAGGAGATTCAGATCTGCCAGACAATGGGATTCAGCCTGCTGAAGATTGTTCCCAGCCCTCAGGATATGCCATTGATGAAGATTTCAACCAGAATAGCCCCAAAAAGAAAAGGCGTAAGTTGGAGCCAGCTGGGGATGGTGAATCTTGTAAGCGTTGTAATTGCAAGAAATCCAAGTGTTTGAAGCTCTACTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCTTGCTCTTGCCAGGATTGCTTCAACAAGCCTATTCATGAGGATACTGTTCTTGCAACTCGCAAGCAGATTGAGTCTCGTAATCCTCTAGCCTTTGCTCCTAAAGTCATTCGAAGCTCTGATTCTGTACCTGAAATTGGGGATGATCCCAACAAAACTCCAGCTTCTGCACGGCACAAAAGAGGATGTAACTGCAAGAAATCAAGCTGCTTAAAGAAATACTGTGAATGCTATCAGGGCGGTGTGGGTTGCTCCATTAGCTGTAGATGTGAGGGATGCAAGAATGCGTATGGTAGAAAGGATGGTTCCATTCCTATTGGAGTAGAGGCTGAGCCAGAAGAAGAAACAGAACCATCTGAGAAGGCTGTGACTGAAAAATCCTTACAAAAATCCGAGATCCAGAACAACGAAGAGCATCTGGAGTCCACACTTCCCACAACACCATTACGAATGTGCAGACCATTGCTTCCTCTATCCTTTTCATCAAAGGGAAAACCACCACGATCCTCTTTCATCACTACCATACCAGCTTCTGGATTGTACGCCAGCCAGAAACTTGGGAAACCCAGCATCCTTCGGTCTCAACCCAAGTTTGAAAAGCAGTTTAAACCCGTTTCCAATGACGAAATGCCGGAGGTTCTCCGGGGTGACGGGTCTCCTAGCATCAAGACATCATCTCCTAATGGCAAGAGGATCTCCTCTCCTAACTGTGACTTTGGGTCATCTCCCAGTCGCAGAAGTGGCAGGAAGTTGATATTACAATCCATCCCATCATTTCCTTCTCTCACTGCTCCTCACCTTTAG 2331 0.4372 MDTPERNQIGTPISKFEDSPVFNFINSLSPIKPVKSVHSIQTINSLSFSSPPSVFTSPHVSCHRESRFLRRHNVIDASKHKVLSEDGKKICSSEEALADSTHTYHNSSELQGNADQGISLEDSTIEPSNEHSDFPIELPQTLKYDCGSPACDPPPGGDETNSLLDLSSKAASDVAYVDEACKKSSPESEVLLPGICQAEPRIGGPECDWDGLLSDATDLLIFNSPNEREALKGLMQKSFDPTGRFSNFMSQLPQTTLSHGERMRIFDPATSGSEHETEDHPSQPEEVIDNDQAQDNLANAAGMGGNPDNTLDNQLVSITRHGIRRRCLDFEMVGGRRKNSNDGSNNSSSSTLQSDERNVANDKQLLPAKRNGNSQKCILPGIGLHLNALASIKDFKSLKVENTSSGRQLSLPSPALQQSSSQEHSLALVPLSTEGDSDLPDNGIQPAEDCSQPSGYAIDEDFNQNSPKKKRRKLEPAGDGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAYGRKDGSIPIGVEAEPEEETEPSEKAVTEKSLQKSEIQNNEEHLESTLPTTPLRMCRPLLPLSFSSKGKPPRSSFITTIPASGLYASQKLGKPSILRSQPKFEKQFKPVSNDEMPEVLRGDGSPSIKTSSPNGKRISSPNCDFGSSPSRRSGRKLILQSIPSFPSLTAPHL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2935g00001 776 MobiDBLite consensus disorder prediction 455 481 - -
Pral2935g00001 776 MobiDBLite consensus disorder prediction 626 646 - -
Pral2935g00001 776 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 772 IPR044522 GO:0003700
Pral2935g00001 776 MobiDBLite consensus disorder prediction 463 481 - -
Pral2935g00001 776 MobiDBLite consensus disorder prediction 338 358 - -
Pral2935g00001 776 SMART CXC_2 481 522 IPR033467 -
Pral2935g00001 776 SMART CXC_2 567 608 IPR033467 -
Pral2935g00001 776 MobiDBLite consensus disorder prediction 619 655 - -
Pral2935g00001 776 MobiDBLite consensus disorder prediction 728 770 - -
Pral2935g00001 776 MobiDBLite consensus disorder prediction 406 426 - -
Pral2935g00001 776 MobiDBLite consensus disorder prediction 334 358 - -
Pral2935g00001 776 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 484 519 IPR005172 -
Pral2935g00001 776 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 570 605 IPR005172 -
Pral2935g00001 776 ProSiteProfiles CRC domain profile. 482 607 IPR005172 -
Pral2935g00001 776 MobiDBLite consensus disorder prediction 702 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2935g00001 Pral-Chr2935 2826 8277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2935g00001 16 775 CPP Transcription Factor Family AT4G14770 44.716 8.02e-169 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pral2935g00001 TCR 3.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2935g00001 - - gmx:100804447 985.711