Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2930g00005 ATGGATATCAACAAAGGCAACGTGGAGGCAGAGACACAGTTGTTTCAAGCTCAGGCCCATGTGTATAAACATGTATTCAATTTCCTAGGTTCGATGAGTTTAAAGAGTGCTCTGCAGCTGAACATACCAGACATAATCCACAGCCATGGCCGGCCCATCACCCTCCCTAAGCTGCTGTTGGCTCTCCATATAGACCCTGCAAAATCTTCACATCTCTATAGGCTCATGCGCTTACTGGTTCACTCTGGCTTCTTTTCTACTGTCAAAGTCCCTAAAGGTGACGAGGAAGAAGTGGGATATGATCTCACACCTTCCTCTAGACTTCTCCTCAAAGACAATGTCCCAAGCTTGTTTTATTTAGCTCAGGCAATGCTTCATCCGGCCATAGTTCATTCGTCGGAGCACTTGGGAGACTGGTTTAGCAGTAATGAGCCCACCCCCTTTTACACTGTATATGGGATGGGATGTTGGGACTATGTCAGCCAAAACAAGGATTTTAGCGGACTCTTTAATGAAGCCCTGATTAGTGATTCAAGCATGATGAACTTGGTAATTAAAGATTGCCGATCAGTTTTTGAGGGATTCAATTCATTAGTTGATGTTGGGGGTGGAAAAGGAGCTGCATCCAGGGTCATATCCGAGTCATTGCCTAATCTGCAGTGCACCGTGCTAGATTTTCCGTATGTTGTTGAAAACTTACAAGACAGCGAAAATTTGAAGTTCGTTGGAGGGGATATGTTTCAGTCTATTCCTGCAGGAGATGCCATTCTTCTTAAGTTGGTTTTACATGGTTATGGTGATGAAGACTGCGTGAAGGTGCTCAAGAAGTGTAAGGAAGCCATCGCAAGCAAAGGCAGAGAGGGGAAAGTGATTATTATAGACAAAGTGATCAATGAGCAGAAAGATGAACGCGATGTAAGAGATGCGAAGCTGTTCTTCGATGTGATGATGATGATTATGACCAATGGAAGAGAGAGAGAAGAAAAAGAATGGGAGAAGCTGTTCTTGGAAGCTGGGTTCAGTCACTACAAGATAACATCCATTTCTGGTCTAAGGTCACTTATTGAAGTTTATCCTTGA 1080 0.437 MDINKGNVEAETQLFQAQAHVYKHVFNFLGSMSLKSALQLNIPDIIHSHGRPITLPKLLLALHIDPAKSSHLYRLMRLLVHSGFFSTVKVPKGDEEEVGYDLTPSSRLLLKDNVPSLFYLAQAMLHPAIVHSSEHLGDWFSSNEPTPFYTVYGMGCWDYVSQNKDFSGLFNEALISDSSMMNLVIKDCRSVFEGFNSLVDVGGGKGAASRVISESLPNLQCTVLDFPYVVENLQDSENLKFVGGDMFQSIPAGDAILLKLVLHGYGDEDCVKVLKKCKEAIASKGREGKVIIIDKVINEQKDERDVRDAKLFFDVMMMIMTNGREREEKEWEKLFLEAGFSHYKITSISGLRSLIEVYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2930g00005 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Pral2930g00005 359 FunFam O-methyltransferase ZRP4 111 359 - -
Pral2930g00005 359 PANTHER O-METHYLTRANSFERASE 15 344 IPR016461 GO:0008168
Pral2930g00005 359 Gene3D - 3 109 IPR036388 -
Pral2930g00005 359 Gene3D Vaccinia Virus protein VP39 111 359 IPR029063 -
Pral2930g00005 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 359 IPR016461 GO:0008168
Pral2930g00005 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 358 IPR029063 -
Pral2930g00005 359 Pfam O-methyltransferase domain 134 341 IPR001077 GO:0008171
Pral2930g00005 359 FunFam Coniferyl alcohol 9-O-methyltransferase 4 109 - -
Pral2930g00005 359 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Pral2930g00005 359 SUPERFAMILY "Winged helix" DNA-binding domain 11 113 IPR036390 -
Pral2930g00005 359 CDD AdoMet_MTases 198 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2930g00005 Pral-Chr2930 43216 44648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2930g00005 32 357 Monolignol Biosynthesis Gene Families AT5G54160 32.733 2.68e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2930g00005 K22588 - qsa:O6P43_012698 493.426