Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2930g00004 ATGGCTATCAACGAAGGCAAGGAGGAGGCAGAGTTGTTTCAAGCTCAGGCCCATCTGTATAAACACGTCTTCAATTTCATAGGTTCGATGTGTCTAAAGAGTGCTCTGCAGCTGAACATACCAGACATAATCCACAGCCATGGCCGACCCATCACCCTCCCTGAGCTGCTCTCGGCTCTCCAGATGGACCCTGCAAAATCTTCTTATGTCTATAGGCTCATGCGCTTACTGGTTCACTCTGGCCTTTTTTCAACTACCAAAGTCCCTATAGGTGAAGGGGAAGAAGAGGGGTACGATCTCACACCTTCCTCTAGACTTCTCCGCAAAGACAATGTTCCAAGCTTGTTCCCTTTCGTTCAGGCAATGTTTCATCCAGCTATAGTGCATCCATCGGAATGCTTGGGAGATTGGCTTAGCAGTAATGAGCCCACCCCCTTTCACACTGCACATGGGATGGGATTTTGGGACTATCTCAGCCAAAACGAGGAGTTTAACAGACTCTTCAATCAAGCTATGATTAGTGATTCAAGCATGATGAACTTGGTAATTAAAGATTGCAGATCAGTTTTTGAGGGATTCAATTCATTAGTTGATGTTGGGGGTGGAAAAGGAGCTGTGTCTAGAATCATATCCACGTCATTGCCTAACCTGCAGTGCACTGTGTTAGATCTTCCACATGTTGTTGAAAACTTACAAGACAGCAGAAATTTGAAGTTCGTTGGAGGGGATATGTTTCAGTCTATTCCTACAGCAGATGCCATTCTTCTTAAGTTGGTTTTACATGCTTACAGTGATGAAGACTGCGTGAAGGTGCTCAGGAAGTGTAAGGAAGCTATCGCAAGCAAAGGCAAAGAGGGGAAAGTGATTATTATAGACATAGTGATCAATGAGAAGAAAGATGAACACGATTTGAAAGATGCGAAGCTCTTCTTCGATGTGTTGATGATGACTGTGGTCACTGGAAGAGAGAGAGAAGAAAAAGAATGGGAGAAGCTGTTCTTGGAAGCAGGGTTCAGTCACTACAAGATAACACCCATTTTTGGCGTAAGGTCCCTCATTGAAGTTTATCCTTGA 1074 0.4423 MAINEGKEEAELFQAQAHLYKHVFNFIGSMCLKSALQLNIPDIIHSHGRPITLPELLSALQMDPAKSSYVYRLMRLLVHSGLFSTTKVPIGEGEEEGYDLTPSSRLLRKDNVPSLFPFVQAMFHPAIVHPSECLGDWLSSNEPTPFHTAHGMGFWDYLSQNEEFNRLFNQAMISDSSMMNLVIKDCRSVFEGFNSLVDVGGGKGAVSRIISTSLPNLQCTVLDLPHVVENLQDSRNLKFVGGDMFQSIPTADAILLKLVLHAYSDEDCVKVLRKCKEAIASKGKEGKVIIIDIVINEKKDEHDLKDAKLFFDVLMMTVVTGREREEKEWEKLFLEAGFSHYKITPIFGVRSLIEVYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2930g00004 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Pral2930g00004 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Pral2930g00004 357 Gene3D - 2 107 IPR036388 -
Pral2930g00004 357 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Pral2930g00004 357 Gene3D Vaccinia Virus protein VP39 108 357 IPR029063 -
Pral2930g00004 357 FunFam O-methyltransferase ZRP4 109 357 - -
Pral2930g00004 357 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pral2930g00004 357 PANTHER O-METHYLTRANSFERASE 11 342 IPR016461 GO:0008168
Pral2930g00004 357 FunFam Coniferyl alcohol 9-O-methyltransferase 2 107 - -
Pral2930g00004 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Pral2930g00004 357 Pfam O-methyltransferase domain 134 339 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2930g00004 Pral-Chr2930 34825 36481 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2930g00004 30 355 Monolignol Biosynthesis Gene Families AT5G54160 34.030 4.17e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2930g00004 K22588 - qsa:O6P43_012698 525.398