Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2928g00004 ATGGCAGAGATGGGTGAGTGTAGCAGTAGAGCCATCAAGGAAGCCGGCAGAAGGGAACCGCTTCTTCCGTCGTCGGACGTCAAGTCGGCGAAGCCTTCTTCTCCAATGTCCTGGAGACTCAATGTTAAGGAGTTTCGTTTGCCAAGCCACAGTGGTGACCATCCTAATCACCGTTCTTTCGGTTTTAAAGGCCTTCTTCGCAGACCCCGAAAGCAACGCAAGGTGGCAGAATATTACAAGAACCAAGAAAGGCTCCTTGAAGGATTCAATGAGATGGATACTATGAATGAAACGGGTTTCTTTCCCGGAAGTCTCACTGAGGATGAAATGAAGCAACTAGCAAAGAGGGAGAGAGTGGCAGTTCATGTGTCAAATTTTGCTAACTTGGTGTTATTTGCAGCAAAGGTCTATGCTTCAGTTATGAGCCAATCGTTAGCAGTCATTGCCTCAACACTAGACTCCCTCCTGGATCTCTTATCTGGGTTGATATTGTGGTTCACTTCCCATGCCATGAAAAACCCAAACCAATATCATTACCCAATTGGCAAGAAACGGATGCAACCAGTGGGTATCATTGTTTTTGCATCTGTGATGGCAACCCTGGCCTGTGAATGCACGTGTGATGTTGCAGAACCAGACGCGGCCACCCAAAAGGACAAACCAAGCCAAACTCTCAAATTCAAGGTCGTCTCTATCGCTTCCATCCTCGTCGCCGGTGCTCTTGGGGTGAGCCTCCCTTTACTGAGCCGGAAAGTCCCATATCTCGACCCCCAGAAGGACGTGTTCTTCATGGTGAAGGCTTTTGCCGCCGGCGTGATCCTCGCAACTGGGTTCGTTCATATATTACCAGACGCCTTCGAGACTCTCACTTCGCCGTGCTTGAAGCACGGCCCGTGGTCCAAATTCCCGTTCACCGGCCTCATCGCCATGGCGGCTTCGGTGGTGACGTTAATGACAGATTCAATCGCCACAGGGTACTATAAGAAGCAACATTTCAACAGCTCAAAGCAAGTTTCTACAGATGCTGATGAATTAGAATCAGGAAATGAAAATGCTGGTCACGTTCATGTGCATACCCACGCCACACATGGCCACGCTCATGGATCATCTCACGATGTCGAACTACTAACATCATCATCAGCTGAAGTGATCCGTCACAGAATCATATCACAGGTGTTGGAGTTAGGAATAGTGGTTCATTCTGTGATCATTGGGATATCACTGGGAGCTGCGCAAAGCGTTCAAACTATAAAGCCTCTTCTTGTGGCACTTTCATTTCATCAGTTTTTTGAGGGCATGGGTCTTGGTGGCTGCATTTGCCAGGCAAAATTCAAGTCAACATCGGCAGCAATAATGGCAATATTTTTCTCACTGACAACGCCAATGGGGATAGCGATAGGAGTGGGAATATCAGGAGTTTACAGAGGCAACACCCCAGCGGCTCTCATAGTGGAAGGAGTCTTCAACTCTGCATCTGCAGGAATTCTCATATATATGGCTTTGGTTGATCTTCTTGCTGCTGATTTCATGAACCCTAAGCTTCAATCCAACTCCAAGATTCAACTTTCTGCTCATCTCTCTCTTCTTCTCGGCATAGCTTCCATGTCTTCCCTTGCCATCTGGGCTTGA 1629 0.4782 MAEMGECSSRAIKEAGRREPLLPSSDVKSAKPSSPMSWRLNVKEFRLPSHSGDHPNHRSFGFKGLLRRPRKQRKVAEYYKNQERLLEGFNEMDTMNETGFFPGSLTEDEMKQLAKRERVAVHVSNFANLVLFAAKVYASVMSQSLAVIASTLDSLLDLLSGLILWFTSHAMKNPNQYHYPIGKKRMQPVGIIVFASVMATLACECTCDVAEPDAATQKDKPSQTLKFKVVSIASILVAGALGVSLPLLSRKVPYLDPQKDVFFMVKAFAAGVILATGFVHILPDAFETLTSPCLKHGPWSKFPFTGLIAMAASVVTLMTDSIATGYYKKQHFNSSKQVSTDADELESGNENAGHVHVHTHATHGHAHGSSHDVELLTSSSAEVIRHRIISQVLELGIVVHSVIIGISLGAAQSVQTIKPLLVALSFHQFFEGMGLGGCICQAKFKSTSAAIMAIFFSLTTPMGIAIGVGISGVYRGNTPAALIVEGVFNSASAGILIYMALVDLLAADFMNPKLQSNSKIQLSAHLSLLLGIASMSSLAIWA 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2928g00004 542 SUPERFAMILY Cation efflux protein transmembrane domain-like 115 279 IPR027469 -
Pral2928g00004 542 Gene3D Cation efflux protein transmembrane domain 118 253 IPR027469 -
Pral2928g00004 542 Pfam Cation efflux family 123 500 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pral2928g00004 542 NCBIfam ZIP zinc/iron transport family 217 542 IPR004698 GO:0005385|GO:0016020|GO:0071577
Pral2928g00004 542 Pfam ZIP Zinc transporter 226 539 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pral2928g00004 542 MobiDBLite consensus disorder prediction 1 35 - -
Pral2928g00004 542 PANTHER ZINC/IRON TRANSPORTER 224 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2928g00004 Pral-Chr2928 33415 48618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2928g00004 203 542 Inorganic Solute Cotransporters AT3G12750 60.000 2.64e-140 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2928g00004 K14709 - qsa:O6P43_029395 454.521