Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2926g00005 ATGGTTTTGGCCTCCCAGACAGACCTTCCTTTCAACGAGAACGACTCACAAGACATGTTCATATACCAAGTCATCCACGAGGCCAATGCTCTTCCCACTACCACCACCACCACCTCCTCCTCCACCGCCGCCAACGCCGCTGCATTCATCCAGCAGAGGCAACAAGCCGCCGCACAGAACGGGCTAGAGCCGACCAGGGCCGTCGGAAAGAAGCATTACAGAGGAGTAAGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGGGACTCTGCCCGGCACGGAGCACGCGTGTGGCTGGGCACGTTCGAAACCGCGGAGGAGGCCGCCATGGCTTACGATCGAGCGGCTTTTCGTATGAGAGGCGCTAAGGCCTTGCTCAATTTTCCCTCGGAAATCGTAGCTTCTTCCGTGGAGATGTCTTGTGATTCTAATAAGCCAAATCTGAGCTCCTCGGGGAGATTCTGTAATCAAGATTCAGATTCAAGTGCTAGCAGCAGTTCCTGCGTTACTTCCATTGGAACAGATAGAACCTTGTTAGAAAGCACAAGCAGCACAAAATACAGTTAG 570 0.5474 MVLASQTDLPFNENDSQDMFIYQVIHEANALPTTTTTTSSSTAANAAAFIQQRQQAAAQNGLEPTRAVGKKHYRGVRRRPWGKFAAEIRDSARHGARVWLGTFETAEEAAMAYDRAAFRMRGAKALLNFPSEIVASSVEMSCDSNKPNLSSSGRFCNQDSDSSASSSSCVTSIGTDRTLLESTSSTKYS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2926g00005 189 SUPERFAMILY DNA-binding domain 72 131 IPR016177 GO:0003677
Pral2926g00005 189 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Pral2926g00005 189 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Pral2926g00005 189 PANTHER DNA-BINDING DOMAIN 29 162 IPR044808 GO:0003700|GO:0009873
Pral2926g00005 189 SMART rav1_2 72 136 IPR001471 GO:0003700|GO:0006355
Pral2926g00005 189 ProSiteProfiles AP2/ERF domain profile. 72 130 IPR001471 GO:0003700|GO:0006355
Pral2926g00005 189 CDD AP2 71 130 IPR001471 GO:0003700|GO:0006355
Pral2926g00005 189 Pfam AP2 domain 72 122 IPR001471 GO:0003700|GO:0006355
Pral2926g00005 189 Gene3D AP2/ERF domain 71 132 IPR036955 GO:0003700|GO:0006355
Pral2926g00005 189 FunFam Ethylene-responsive transcription factor 2 71 132 - -
Pral2926g00005 189 MobiDBLite consensus disorder prediction 148 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2926g00005 Pral-Chr2926 32692 33719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2926g00005 5 133 AP2-EREBP Transcription Factor Family AT4G17500 49.655 8.07e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral2926g00005 AP2 2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2926g00005 K13433 - qsa:O6P43_012708 186.037