Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2926g00003 ATGGCTTCTTCTAACCCTAACAGACACTGGCCAAGCATGTTCAAGTCCAAGCCTTGCAGTAACTCCCTCCACCACCACCACCAATGGAAGCTTGACAATATCAACTCCCCTTTCATCTCGCCTTCAAGCTGCCACAGAACCTCTTACACATCTGGAGTTGAGGAGGAGAGAAGTGCAGAGCCGAAGCCAAGATGGAACCCAAAACCAGAGCAGATTCGGATACTAGAAGCCATATTCAACTCAGGGATGGTGAACCCTCCAAGAGACGAGATCAGGAAGATCAGAGCCCAACTCCAGGAGTATGGCCAAGTCGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGTAAATCCAGATCCAAGCACAAGCTTCGTAATCTCCACAACTCTTCTAACGCCCACCAAACCCAAAACTTAAGCAATTCCACTCACAAAGAAATCATAACACCACCTAATAAGGCATTTGTGTCTAATATTGTCTTTTCCGATGTCTCTTCTGATATTGTAGTTCCCATTTCTTCTGCCCCGCGGCCACCAACACCGCCATCTCCAACTCCGCCTCAGCCTTTCTTCTTTATTCCTGGGCAGCAGAATGGAGGAGCTGGAACAGCGGCTAATAGTGCTGTTCCTGCTCCTATTACACAAGGTTTTTGCTTCTCTGAACTATCAAGTGTGGTTCAACCTGATGGTCCTCGTGATCATCATCAACAAATCAATGTTGGGTCTTGCACTAATAGTCTTTTGCTTAACGAAATCATGATCCATTCATTTTCCAAGAATGACCAAGAGAAGGTTATTATGCAAATGCAACAACACCTTCCAACCACTCACACTACTGTCCCTCCCGCCACTACCACCACTGTTACTGTTCCATCCCCCATCTCTCAGATTCAAGGGACGGAAGAGGGCCGACCTGGTGCTCCGATGAAATCCACGGTGTTCATTAACGATGTCGCATTCGAAGTGGGTGTGGGACCCCTCAACGTGGGGGAGGCCTTCGGCGACGATGCGGTGCTCATCCACGCCTCCGGTCAGCCTGTGCTCATCGACGAATGGGGCGTCACTCTCCAGCCTCTCCAGCACGGCGCATTTTATTACCTGGTTTGGAAGGAAGAAATATGTGGAGGAGGACGGAATGGGATTTAA 1146 0.4904 MASSNPNRHWPSMFKSKPCSNSLHHHHQWKLDNINSPFISPSSCHRTSYTSGVEEERSAEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRNLHNSSNAHQTQNLSNSTHKEIITPPNKAFVSNIVFSDVSSDIVVPISSAPRPPTPPSPTPPQPFFFIPGQQNGGAGTAANSAVPAPITQGFCFSELSSVVQPDGPRDHHQQINVGSCTNSLLLNEIMIHSFSKNDQEKVIMQMQQHLPTTHTTVPPATTTTVTVPSPISQIQGTEEGRPGAPMKSTVFINDVAFEVGVGPLNVGEAFGDDAVLIHASGQPVLIDEWGVTLQPLQHGAFYYLVWKEEICGGGRNGI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2926g00003 381 ProSiteProfiles 'Homeobox' domain profile. 58 123 IPR001356 GO:0003677
Pral2926g00003 381 Pfam Homeodomain 62 122 IPR001356 GO:0003677
Pral2926g00003 381 SUPERFAMILY Homeodomain-like 60 125 IPR009057 -
Pral2926g00003 381 MobiDBLite consensus disorder prediction 50 67 - -
Pral2926g00003 381 CDD homeodomain 61 123 IPR001356 GO:0003677
Pral2926g00003 381 SMART HOX_1 60 127 IPR001356 GO:0003677
Pral2926g00003 381 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 369 IPR044557 GO:0003700|GO:0050793
Pral2926g00003 381 FunFam WUSCHEL-related homeobox 11 62 129 - -
Pral2926g00003 381 MobiDBLite consensus disorder prediction 45 67 - -
Pral2926g00003 381 Gene3D - 62 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2926g00003 Pral-Chr2926 16076 17676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2926g00003 1 368 Wox Gene Family AT5G45980 39.164 3.30e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral2926g00003 Homeodomain 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2926g00003 - - pcin:129300954 490.345