Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2923g00012 ATGTCTTCCTCATCATCTTCTTCTTCGTCTTCATCTTCCCCTCACGATAGTCCCAATCATAACCATAATGCTGGTGCTGATCCTGGCCCTAGCTCAAGAACAATCTCATATTCTGACGAGCCCACTTCGTCTCGTCCACGTCGTGCCATGAATGATGTTTGGCCTGATCTTTTTCTTGAAGACTTAACCGTCCAAGTCGCCACTGATGCTTCTCACTCTTCTGGTCGTCTTTCTGCAGCTCCTGCGCTTGCCAACTTGTTTCAGGTTTGTTCGAGGTGGCGGGCTGTGTCACGGTCGGATCGCCTGTGGCAGCAGCTCACCGAGAGGATATGGCGGCGCACAGTGCAAGTGCGAGACACGTGGTATGAAGAGTTCATTCACTGGCACCGAATGGCCAGGAATTTCGTCGCCGGCAGATATGCTTACGCCTCCCTGTGGTTTGGCCCGTCGGACATGGATGACGACCACTACAGCACCGTGATCTGCCGCTGCCTCACCCTCTCCGATGAACATCTCGCCTGCGGCTTCACCGACGGCACCGTCCGCCTCTTCCACCTCGATACTCGCGTCCACTTCAGGACATACCGGTCCCACCAAGCCAACCGTTTAGGTCCCTTCGCGAGATCCGTGTCTGGCATCGTGATCGCTGACAACAGGCTCGTCTTCGCCACGCTGGACGGGGACATCTACGTGGCACACCTCGACGAGCCAAATGGTCACACCCGTAGGGCCCGCGTCGGTGACGTGGTCAATAGCGGAGTCCTCGTAGAGTTCGCCGGACGTGGCCGTTGGTGGGTAGGACTCTTCGCCGGGCTCCCGGGCCAGGCGTTTCAGATTTGGGACGCAGAAAACGAACAGCTCGTGTTCATCGGGGGATCCTTGACTGACCCGGAAACCGTCATGGGTTGGCACATGCTGACGGAGTTGATCGAACCGGTGGGTCGGCTTCGGGTGACGAACCAAGGCCTGGCAGTGGCATGTACGAGCTCACAGCTCATAGTGTTCGACCTGAACAGCCAGATGTTATTACATGAGCTCTGGTCCACTGTGGGCGGCTTCATTGTAACATCGATGGACGTGAACGATGAGGCGTTCTTTATCGTGGAAAGGAACGGCGACGCTAAGGTGCGCCTGGCGGGCACGTTAGAGCTGCTATGTGAATTCCGGACACGTCCGTTGAGGGGTTTGATGGGATGCAGGAACATGGGGTACGCGCTAACGTGCGCCGGGGGTGTGGTGAGGGTCTGGGACATTGAGCGACGGCGGGGACAGCAGCGTTCGGTGGTGGCAGAGAGGGTGGGGGAGGGGATGGCCATGGTGTGCAGCGAGAGACACGTGGCCATTTCTTGTAATGACAGGTCGATACACCTTTGGGATTTCGGTGTATAA 1389 0.5724 MSSSSSSSSSSSSPHDSPNHNHNAGADPGPSSRTISYSDEPTSSRPRRAMNDVWPDLFLEDLTVQVATDASHSSGRLSAAPALANLFQVCSRWRAVSRSDRLWQQLTERIWRRTVQVRDTWYEEFIHWHRMARNFVAGRYAYASLWFGPSDMDDDHYSTVICRCLTLSDEHLACGFTDGTVRLFHLDTRVHFRTYRSHQANRLGPFARSVSGIVIADNRLVFATLDGDIYVAHLDEPNGHTRRARVGDVVNSGVLVEFAGRGRWWVGLFAGLPGQAFQIWDAENEQLVFIGGSLTDPETVMGWHMLTELIEPVGRLRVTNQGLAVACTSSQLIVFDLNSQMLLHELWSTVGGFIVTSMDVNDEAFFIVERNGDAKVRLAGTLELLCEFRTRPLRGLMGCRNMGYALTCAGGVVRVWDIERRRGQQRSVVAERVGEGMAMVCSERHVAISCNDRSIHLWDFGV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2923g00012 462 MobiDBLite consensus disorder prediction 1 49 - -
Pral2923g00012 462 SUPERFAMILY WD40 repeat-like 156 459 IPR036322 GO:0005515
Pral2923g00012 462 PANTHER WD40 REPEAT PROTEIN 12, 37 15 421 - -
Pral2923g00012 462 SUPERFAMILY F-box domain 82 130 IPR036047 GO:0005515
Pral2923g00012 462 Gene3D - 152 461 IPR015943 GO:0005515
Pral2923g00012 462 MobiDBLite consensus disorder prediction 1 44 - -
Pral2923g00012 462 Gene3D - 75 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2923g00012 Pral-Chr2923 102618 108000 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Pral2923g00012 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2923g00012 - - pcin:129302822 796.964