Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2921g00009 ATGTTTGCCACGACCGTGTTTCCCTCCGTCTACACCTTCCGGTTTGCCACCATAAGACCATCCGAATCCAGTTCAACCAATTCTTTTCCTCTGAAGCTCAGAGCATCGCTCAATGACTATCCGCTCGCAAGTAAAATTGTGGTTAAAAATTTACCATATTCTACTGGTGAGACTATTCTCAAGAAGGAATTTTCAAACTTTGGTGAGATAGCTGAAGTTAAAGTTGTTAAAGATACCACCAAAAAATCTAAGGGATATGCATTTATTCAGTACACTTGTCAAGATGATGCAATGCTTGCACTAGAAAACATGGATCAAAAGGCATTTGATGGTCGGAAAATATATGTAGAAATTGCAAAACCTGGGAAGGATGCTTTTCGTGGCCACCCAAAGACCTCAGGGCCCCCTAAGAAGTGGCATCAGCCAGATCAAGAGGAAGTGGTGGATTGCTGGTACTGA 459 0.4227 MFATTVFPSVYTFRFATIRPSESSSTNSFPLKLRASLNDYPLASKIVVKNLPYSTGETILKKEFSNFGEIAEVKVVKDTTKKSKGYAFIQYTCQDDAMLALENMDQKAFDGRKIYVEIAKPGKDAFRGHPKTSGPPKKWHQPDQEEVVDCWY 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2921g00009 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 121 IPR000504 GO:0003723
Pral2921g00009 152 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 44 141 - -
Pral2921g00009 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 114 IPR000504 GO:0003723
Pral2921g00009 152 CDD RRM_SF 46 117 - -
Pral2921g00009 152 Gene3D - 23 146 IPR012677 -
Pral2921g00009 152 SMART rrm1_1 45 117 IPR000504 GO:0003723
Pral2921g00009 152 MobiDBLite consensus disorder prediction 125 145 - -
Pral2921g00009 152 MobiDBLite consensus disorder prediction 125 146 - -
Pral2921g00009 152 SUPERFAMILY RNA-binding domain, RBD 44 131 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2921g00009 Pral-Chr2921 144593 148561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2921g00009 43 124 Eukaryotic Initiation Factors Gene Family AT4G34110 32.927 1.59e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2921g00009 - - minc:123226984 187.193