Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2920g00001 ATGAATGTTCTTGAAGTTTGCAGGGTGCCACCGCCACCAGAAGCGGCACCTTCCGCCGCCGCATCGGAAACTTCTCTACCACTCACCTTCTTCGATTTAGTGTGGCTGAGATTACGGCCCGTTGAGCGTCTTTTCTTCTACGAACTCCCCAACCCACCTTCCTTCTTCTTCCATTCCGTTCTCCCAAAACTCAAGTACTCCCTTTCTCTTACTCTCCATCACTTCTTTCCTCTCTCCGGCAACATCAAATGGCCGCGTCACTGCCGGAAGCCCTTCATCCATTATATCTCCGGCGACGGCGTCTCACTCACCGTTGCAGAATCGAACGCAGATTTCAACATTCTCTCAAGTTCTGATTTCTCTGATGCCGAAGAAAGTCGCCTGCTGGTACCCGACTTGATCGTTTCCGATGATGAAGCTTCTATCGTGGCCCTGCAAATCACACTGTTCCCAAACGCTGGCTTCTCTATTGGAATAACCACGCACCACGCAGCCATGGATGGAAAATCTTCAACTTTGTTTATGAAATCATGGGCTTATATCTGCTCTAAACTAGATGAATCCTCATCAGATTCGTCGCTTCCCGGGAATCTAATGCCATTCTTTGACAGGTCTGTGATGAAAGACTCCTCTGGGGTTGCAGAGATATTTTCAAATCATTGGTCAAAACAAGGTGAACCAAATAACAGAAGCTTAAAGTGGTGGGATATTAAGAGCACAAATCAAGGGAAGCCAATTAGGGGAACATTTGAATTGGTTCCATCAAACATTCAAAAGCTTAAGCAGATTGCAGAGTCTAAGCTGAACAAGAAGGTTCATCTATCAACCTTTTCAGTAACATGTGCCTATATGTTAAACTGCTTGGTCAAAGCAGAGCAAACAAAACAAGATAAGTTTCTGTTCATATTTGCTGTGGATTGTAGATCTCGTTTGGATCCTCCAATTCCACCCACATATTTTGGAAGCTGTGTTGGGGGTGCTAAAGCTGTGGCTGAAACAAACACCTTGCTTGGGAATGATGGGTTCATCGCTGCTCTTGAGGCCATAAGCGATGCTTTGAAGAGATTTGAAGATGGAGGATTAAGTGGAGCAGAAAAATGGATGGCTGAGATACAAAGTCTTGGGAAAACTCATAGATTTTTTTCAACTGCAGGGTCACCACGGTTTGAGGTTTACGGTATTGATTTTGGTTGGGGAAGGCCCAAGAAGGTGGAGATAGTTTCCATAGGCAAGACTGGAGCTTTCTCACTTTCAGAAAGCAGGAACGGCAGTGGAGGGATTGAGATTGGATTGGTGTTGAACAGACCAGAAATGGAGGCTTTTACTGCTTTGTTTCACGAAGGTCTTGCTTCAGGTTCATGA 1362 0.453 MNVLEVCRVPPPPEAAPSAAASETSLPLTFFDLVWLRLRPVERLFFYELPNPPSFFFHSVLPKLKYSLSLTLHHFFPLSGNIKWPRHCRKPFIHYISGDGVSLTVAESNADFNILSSSDFSDAEESRLLVPDLIVSDDEASIVALQITLFPNAGFSIGITTHHAAMDGKSSTLFMKSWAYICSKLDESSSDSSLPGNLMPFFDRSVMKDSSGVAEIFSNHWSKQGEPNNRSLKWWDIKSTNQGKPIRGTFELVPSNIQKLKQIAESKLNKKVHLSTFSVTCAYMLNCLVKAEQTKQDKFLFIFAVDCRSRLDPPIPPTYFGSCVGGAKAVAETNTLLGNDGFIAALEAISDALKRFEDGGLSGAEKWMAEIQSLGKTHRFFSTAGSPRFEVYGIDFGWGRPKKVEIVSIGKTGAFSLSESRNGSGGIEIGLVLNRPEMEAFTALFHEGLASGS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2920g00001 453 PANTHER - 2 450 - -
Pral2920g00001 453 Gene3D - 244 451 IPR023213 -
Pral2920g00001 453 Gene3D - 1 232 IPR023213 -
Pral2920g00001 453 Pfam Transferase family 17 443 - -
Pral2920g00001 453 SUPERFAMILY CoA-dependent acyltransferases 250 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2920g00001 Pral-Chr2920 14555 16288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2920g00001 17 447 Monolignol Biosynthesis Gene Families AT5G48930 26.233 1.20e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2920g00001 - - gmx:100785084 498.049