Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2918g00006 ATGTCGAGCAATTCCCTGCCGTCATCGCATCTCTCCGACGTATCGCAGACGAATCCCACCGGCAATGATTCCACTTCGAACATATCATCGCCGGCGTCATCACGAGCCAAGCTCCAGAAAAGTCCTCCGATTCCAAATCGGTGGACTACTGCGATAGAGGAAGAAGGCGAGCAAAGAAATGAGGAGGCGGTACGTAAACTAGAACAGGCGCAAATCGAAGATGCTAGTGCTTCTATTTTGCTTGCATCGTCTTTAGGGCTCAATCACATCCGGACTCGCTCGGCTTCTTCGCCTCTTCGGTTTCCGTCCCTGGCCGAAGCGTCTCCCAGTTCGAGCAAGGATTTTGTCGGAACTGACGATCGGACCAACGTCAAATCCATTATTTCAACGGATCTTGGAAAGAGGATATATGGGACTCAATGTAAATTGTCAAGAGCTCCTTCCCATGCTGTTCCTCTCATGCAGGGTAACGATGATACATTTGCCAAAGAACTGCAGTCGCCGCGTGTTCAAGCAATACTGCGTGTCACAAGTGGACGCAAGAAGAAACCCGTTGATTTCTTCAAAAGCTACTCTCATGAGCTCAACTCAAAAGGATTCAGACCTTTTCCAGTTTGGAAAAATCGTGCGTTGGGGCATATCGAGGAGGTCACGGTGGCCATCAGAACTAAGTTTGGAAAGCTAAAGGAAGAAGTTGATTCTGAATTAAATGCTTTTGCCGGAGATTTGGTGGGACTCCTGGAAAAAATTTCAGAATCTCATCCGGAATGGAGAGAGAGCTTGGAGGATCTGTTAATTATTGCCCAACAGTGTGCAATGATGTCGCCCAGCGAGTTTTGGATGAACTGCGAAGCCATTGTTCAGAATTTAGATGACAGACGTCAAGAGTTACCGATGGGGATTCTCAAACAAGCTCATACACGCCTACTGTTTATCCTCACTCGATGCACACGTCTCGTGCAGTTCAACAAAGAGAACATCTGTGAACAGGATCACATTCTGGGCCTCCACCAACTCAGTGATCTTGGTATATATAGAGAGCAAATTTTGCATGCTGTAGAACATAAATCCATGGGTGGAAACGATATGGCTGATGAGGAGCAGCTAATAAAGCCCCATGAAAAAGAACCAGACAATCAGATATTAAATCAAATCCAAGTTGATCAGCATGTGAGTACTGCAACTGACACTGCCAGAAGTGGTGATTCAACTGGAAGCAGCTATAAGATTTCATCTTGGAAAAAGTTTCCAAGTCATGAGAAGTCTAAACATAAAGGTCACGAGGCCGAAGATTTGTCTTCCAAGGAAGAACAGGATCAGGTTCAAGTCAAAGAAGAAAATGTCGAAAACGTGGATACTGATTCATCCAATCCTGAACAATCAGAACTATCCTCCAGAGCCCAAAAGCTACACTGGGGATTCTGGGGAGATCACCACAATCTAACATATGAGAACTCAATGATCTGCAGAATCTGTGAGGTTGAGATACCAATTGTATATGTGGAGGAGCACTCTCAAATATGTACTATTGCTGATAGATGCGATTTAAAAGGCCTTACAGTAAATGAACGGCTTGAAAGATTTGCTGAAACTATTGAAAAGATAGTAGAATCGTGGACGCCTAGAAGCACACCTAAAAGCACCCCGAAAAGCACTGATGGTCCTGGAGAAAACTTTGAGAATGCGAGAGTATCTACGTCAAGTTTGCATGATGAATTCAACGACTTATCTCTTGAGAGGAACAGCTTATCTCGCAGGGGCTCACAAGACCTGCTTGATTCTGTTCCTGAAGATGACAGTGCTTTTGTTAAGGATGATATGAGCCTTTTGCCAAAAATGTCATGTGAAACATATATCAAACATGATCAATGCTCAAAGATGTCTTCGGTGGGAAGCTTGACACCAAGATCACCGTTATTAACCCCACGAACAAGCCAAATAGAAATGTTATTAAGTGGGCGAAGAACAATATTGGAGCTTGAGAGTTATTTCCAGATTATCAAACTAGTGGAAATTGCTCGTTCTGTTGCAAATGTGAATGACTACAACTATGTAAGTCGTCGCGTAGAAGAACTAAATCTCACCATTCAGGACAGAAAAGTCGATGCTCTTATTGTCGAAACTTTTGGGCGACGCATAGAGACTCTCTTGTCGGAAAAATATCTATCTCTTTGTCATCAAATAGACAACGAAAAGGTAGACTCATCGAATGGATTGGCTGAAGAAGAGAGTTCAGTGGAAGATGATAATGTTCGAAGCCTTCGTGCTAGCCCAATTCATCATAGTTCTAGGGATCGAACCTCCATTGAAGACTTTGAAATAATAAGACCAATAAGCCGAGGTGCATTCGGACGAGTTTTCCTTGCCCGGAAAAGAGCAACGGGAGATTTATTTGCCATAAAGGTTTTGAAAAAAGCCGATATGATCCGTAAAAATGCAGTTGAAAGTATTTTGGCTGAGCGAGACATCCTTATATCAGTCCGAAATCCCTTTGTGGTTCGATTTTTCTACTCTTTCACGTGTAGGGAAAACCTTTATTTGGTTATGGAATTTTTAAATGGTGGAGACCTTTATTCTCTATTGAGAAATCTAGGTTGTTTAGATGAAGATATGGCACGTGTATATATTGCAGAAGTTGTGCTTGCATTGGAATATTTGCATTCCCTACATGTAATTCATAGAGATCTGAAGCCTGATAACTTGTTAATTGGTCAAGATGGTCACATCAAGTTGACAGATTTTGGGCTCTCCAAGGTTGGTCTTATTAACAGCACGGATGACTTGTCAACTTCATCATTTTCTACTGATGATCTTGTAGGAAATGATGAACCGAAAAAAGATCATTCTTCAAAAGTGGAACAACGTCAAAAGCAGTCAGTTGTTGGCACCCCAGATTATTTGGCACCTGAAATACTTCTCGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCTGTGGGAATTATACTTTATGAGCTCCTTGTGGGTATTCCACCATTTAATGCAGAACATCCACAGGAAATTTTTGACAAAATAATTAATAGAGACATACAGTGGCCAAAGGTGCCCGAGGAGATGAGCTATGAAGCATATGATTTGATTGACAAATTACTCACTGAGAATCCAGTCCAAAGATTGGGAGCAACAGGAGCTGGTGAAGTTAAAAGTCACCCTTTCTTCAAGGATATTAATTGGGATACCCTAGCAAGACAGAAGGCTGCGTTCATACCTTCAGCTGAAAATCATGACACGAGTTATTTCATGAGCCGCTACATATGGAACCCAGAGGATGAACATCTTACTGGAGGTAGCGATTTTGATGACCTGACCGATTCTTGCTTCAGTGGTTCAGGCAGCGACTTTGTAGATGAAGATGGGGACGAATGTGGTAGCTTAGCAGATTTTAGCGGACCACCTACTGAAGTGCAGTACTCATTTAGTAATTTCTCCTTTAAGAACTTGTCTCAGTTAGCATCTATCAATTATGATTTGGTGATCAAGAACGCCAAAGAATCATCCGATGACTCCAAGCCATCTGCTCCGTGA 3546 0.4264 MSSNSLPSSHLSDVSQTNPTGNDSTSNISSPASSRAKLQKSPPIPNRWTTAIEEEGEQRNEEAVRKLEQAQIEDASASILLASSLGLNHIRTRSASSPLRFPSLAEASPSSSKDFVGTDDRTNVKSIISTDLGKRIYGTQCKLSRAPSHAVPLMQGNDDTFAKELQSPRVQAILRVTSGRKKKPVDFFKSYSHELNSKGFRPFPVWKNRALGHIEEVTVAIRTKFGKLKEEVDSELNAFAGDLVGLLEKISESHPEWRESLEDLLIIAQQCAMMSPSEFWMNCEAIVQNLDDRRQELPMGILKQAHTRLLFILTRCTRLVQFNKENICEQDHILGLHQLSDLGIYREQILHAVEHKSMGGNDMADEEQLIKPHEKEPDNQILNQIQVDQHVSTATDTARSGDSTGSSYKISSWKKFPSHEKSKHKGHEAEDLSSKEEQDQVQVKEENVENVDTDSSNPEQSELSSRAQKLHWGFWGDHHNLTYENSMICRICEVEIPIVYVEEHSQICTIADRCDLKGLTVNERLERFAETIEKIVESWTPRSTPKSTPKSTDGPGENFENARVSTSSLHDEFNDLSLERNSLSRRGSQDLLDSVPEDDSAFVKDDMSLLPKMSCETYIKHDQCSKMSSVGSLTPRSPLLTPRTSQIEMLLSGRRTILELESYFQIIKLVEIARSVANVNDYNYVSRRVEELNLTIQDRKVDALIVETFGRRIETLLSEKYLSLCHQIDNEKVDSSNGLAEEESSVEDDNVRSLRASPIHHSSRDRTSIEDFEIIRPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEFLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHSLHVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSTSSFSTDDLVGNDEPKKDHSSKVEQRQKQSVVGTPDYLAPEILLGMGHGATADWWSVGIILYELLVGIPPFNAEHPQEIFDKIINRDIQWPKVPEEMSYEAYDLIDKLLTENPVQRLGATGAGEVKSHPFFKDINWDTLARQKAAFIPSAENHDTSYFMSRYIWNPEDEHLTGGSDFDDLTDSCFSGSGSDFVDEDGDECGSLADFSGPPTEVQYSFSNFSFKNLSQLASINYDLVIKNAKESSDDSKPSAP 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2918g00006 1181 MobiDBLite consensus disorder prediction 390 413 - -
Pral2918g00006 1181 MobiDBLite consensus disorder prediction 414 451 - -
Pral2918g00006 1181 CDD STKc_MAST_like 778 1065 - -
Pral2918g00006 1181 SUPERFAMILY Protein kinase-like (PK-like) 769 1088 IPR011009 -
Pral2918g00006 1181 MobiDBLite consensus disorder prediction 1 48 - -
Pral2918g00006 1181 MobiDBLite consensus disorder prediction 931 957 - -
Pral2918g00006 1181 FunFam probable serine/threonine protein kinase IREH1 770 859 - -
Pral2918g00006 1181 MobiDBLite consensus disorder prediction 390 464 - -
Pral2918g00006 1181 ProSiteProfiles AGC-kinase C-terminal domain profile. 1061 1161 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral2918g00006 1181 MobiDBLite consensus disorder prediction 1 46 - -
Pral2918g00006 1181 MobiDBLite consensus disorder prediction 539 561 - -
Pral2918g00006 1181 Gene3D Phosphorylase Kinase; domain 1 770 1087 - -
Pral2918g00006 1181 Coils Coil 53 73 - -
Pral2918g00006 1181 ProSiteProfiles Protein kinase domain profile. 772 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2918g00006 1181 PANTHER SERINE/THREONINE-PROTEIN KINASE 454 1121 - -
Pral2918g00006 1181 SMART serkin_6 772 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2918g00006 1181 ProSitePatterns Serine/Threonine protein kinases active-site signature. 891 903 IPR008271 GO:0004672|GO:0006468
Pral2918g00006 1181 MobiDBLite consensus disorder prediction 939 954 - -
Pral2918g00006 1181 Pfam Protein kinase domain 773 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2918g00006 1181 Gene3D Transferase(Phosphotransferase) domain 1 856 1078 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2918g00006 Pral-Chr2918 94452 111781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2918g00006 38 1181 AGC Kinase Gene Family AT5G62310 60.884 0.0 1355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Pral2918g00006 Pkinase 6.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2918g00006 - - pcin:129301583 1820.82