Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2914g00004 ATGGCTTTGCAAAACATTGGAGCTGGAAACAGTGATGATGCCTTCTACAGATATAAGATGCCCAAAATGATTACCAAAATCGAGGGCAGAGGCAATGGCATCAAAACCAACATAGTTAATATGGTTGATATTGCAAAGGCTTTGGCAAGGCCAGCTTCTTACACAACCAAATATTTTGGTTGTGAGCTTGGAGCTCAATCCAAATTTGATGAGAAAGCTGGGACTTCTCATGTTAATGGGGCACATGATACTGCAAAACTTGCTGGTCTTCTGGAGAACTTCATTAAGAAATATGTTCAGTGTTATGGTTGTGGGAATCCTGAAACGGAGATCATGATCACCAAGAGTCAAATGATCCAGCTAAAATGTGCTGCTTGCGGCTTTGTGTCAGATGTGGACATGAGAGACAAGCTGACCACCTTTATAATCAAGAATCCTCCTGAATCCAAGAAAGGGTCCAAAGACAAGAAGGCGATGAGGAGAGCTGAGAAGGAGAGACTGAAAGAAGGTGAAGCAGCTGATGAGGAACTGAAAAAATTGAAAAAGGAGGGTAAGAAGAAGGGTTCTTCCTCTTCCAAGGATGGAACTACAAAATCAAAAAAGAAATCCACTGGCTCTGATGAGGACCGTGCATCACCTACTCATGGTCAGGTTCATGAGGAACCTCGTGTTGAAGAGGAAGAGGATCATGATGTCCAGTGGCAAACAGATACATCACTGGAGGCTGCTCGCCAGCGCATCCAGGAACAATTAAGTGCTGTGACAGCTGATATGGTTATGCTCTCTACGGAAGAGCCAGAGAAGAAGGCAAAAGCAGCTAACAAGGTTAATGGTGGGTCTGAGAATGGGACCTCAATGTCATACAGGTCTCTTGTTGAGGAAGTCAAATCTGATTTGCAGAAAGGTGTATCTGCGAAGGAACTTCAGCACCATTTAGCATCCCTTTCTGCATCTTCTCAGGAAAAAATGAGTGCTTTGTTTGAGGCCCTTCTTTCCGGCATTGAGAAAGGATTCGCCAAGGAAGTTGTCAAAAAGAGGAGCTACCTTGCTGCTGCTGTTGCTGGGGAGGAAGGATCGCAGATGCTATTGCTCCATGCAGTTGAGGACTTCTGCTGCAAGGGCAGTTCCAATGCTTTGAAGGAGGTTGCCTTAGTGCTGAAGGCACTTTATGATGCTGATGTGCTGGAAGAAGAGCACATAGTGCAATGGTATCAGAAAGGGCTCAAGGGAGATTCCAAGGACTCTAAGATATGGAAGAATGCTCAACCATTCATCGAGTGGCTTCAGAATGCAGAATCAGAGTCAGAGGAAGAGTAA 1317 0.448 MALQNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKAGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIMITKSQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPESKKGSKDKKAMRRAEKERLKEGEAADEELKKLKKEGKKKGSSSSKDGTTKSKKKSTGSDEDRASPTHGQVHEEPRVEEEEDHDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTEEPEKKAKAANKVNGGSENGTSMSYRSLVEEVKSDLQKGVSAKELQHHLASLSASSQEKMSALFEALLSGIEKGFAKEVVKKRSYLAAAVAGEEGSQMLLLHAVEDFCCKGSSNALKEVALVLKALYDADVLEEEHIVQWYQKGLKGDSKDSKIWKNAQPFIEWLQNAESESEEE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2914g00004 438 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Pral2914g00004 438 MobiDBLite consensus disorder prediction 143 234 - -
Pral2914g00004 438 Gene3D - 105 145 - -
Pral2914g00004 438 FunFam Eukaryotic translation initiation factor 5 284 429 - -
Pral2914g00004 438 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Pral2914g00004 438 SUPERFAMILY ARM repeat 288 432 IPR016024 -
Pral2914g00004 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 437 IPR045196 GO:0003743|GO:0006413
Pral2914g00004 438 CDD W2_eIF5 290 436 - -
Pral2914g00004 438 ProSiteProfiles W2 domain profile. 281 438 IPR003307 GO:0005515
Pral2914g00004 438 Gene3D - 3 104 - -
Pral2914g00004 438 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Pral2914g00004 438 SMART 542_3 346 434 IPR003307 GO:0005515
Pral2914g00004 438 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Pral2914g00004 438 Pfam eIF4-gamma/eIF5/eIF2-epsilon 360 438 IPR003307 GO:0005515
Pral2914g00004 438 Gene3D - 279 429 - -
Pral2914g00004 438 MobiDBLite consensus disorder prediction 148 234 - -
Pral2914g00004 438 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Pral2914g00004 438 MobiDBLite consensus disorder prediction 265 285 - -
Pral2914g00004 438 FunFam Eukaryotic translation initiation factor 5 105 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2914g00004 Pral-Chr2914 90743 92738 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2914g00004 1 431 Eukaryotic Initiation Factors Gene Family AT1G77840 63.761 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2914g00004 K03262 - gmx:100777906 626.32