Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2908g00007 ATGCTGAAATTCCAGGAGCTTATACGCAGAGATATGGATAAACTCGCTCTGAACGTTACCACCGAACAAGGAAAGACATTGAAGGATGCACAAGGAGATGTATTCCGTGGGTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTTTACAAATGGGGGAGTATGTTTCTAATGTATCGCATGGAATTGATACGTACAGCATTAGAGAGCCACTTGGTGTTTGTGCTGGGATATGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCAGTGGCAGTTACTTGTGGGAACACCTTCGTTCTAAAGCCATCAGAAAAAGATCCAGGTGCTGCTGTAATGCTTGCAGAATTAGCATTGGAGGCTGGTCTGCCTGAAGGCGTCTTGAATATTGTTCACGGAACCAATGGTATTGTAAATGCTATTTGTGATGACGACGACATCAAAGCTGTATCTTTTGTTGGTTCAAATGTTGCTGGAATGCATATATATTCAAGAGCATCAGCTAAAGGAAAACGTGTTCAATCTAATATGGGAGCAAAAAATCATGCAATTGTCATGCCTGATGCCAACGTTGATGCTACTGTGAACGCTTTAGTTGCTGCTGGCTTTGGTGCAGCAGGACAAAGGTGTATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGATCAAAACCATGGGAATCTATATTAGCGGAGCGTGCCAATGCACTCAAAACGAGTGTTGGAACTGATCCAGATGCAGACCTTGGTCCAGTCATCAGTAAACAGGCAAAGGAGCGCATACACAAATTAATTCAATCTGGTGTTGAAAGTGGGGCCAGACTGCTGCTTGATGGAAGAAATTTAGTGGTTCCAGGCTATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATGTCGGTGCGAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCATGGAGGCTGACAGTTTGGAAGAGGCCATAAACATTGTAAACAGAAACAAATATGGAAATGGTGCTTCTATATTTACTACATCTGGTGTTGCAGCAAGGAAGTTTCAGACCGAGATTGAAGCTGGACAGGTTGGCATCAATGTTCCGATTCCAGTTCCATTGCCCTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCCGGAGATCTCAATTTCTATGGGAAGGCTGGGGTTAACTTTTATACTCAGATTAAAACAGTGACTCAGCAATGGAAGGATTCTGCTGGTGGCAGCAGAATTAACTTGGCAATGCCGACCTCTCAAAAATCTTGA 1296 0.4352 MLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAAVMLAELALEAGLPEGVLNIVHGTNGIVNAICDDDDIKAVSFVGSNVAGMHIYSRASAKGKRVQSNMGAKNHAIVMPDANVDATVNALVAAGFGAAGQRCMALSTVVFVGGSKPWESILAERANALKTSVGTDPDADLGPVISKQAKERIHKLIQSGVESGARLLLDGRNLVVPGYESGNFIGPTILSDVGANMECYKEEIFGPVLLFMEADSLEEAINIVNRNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQQWKDSAGGSRINLAMPTSQKS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2908g00007 431 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 428 IPR010061 GO:0004491
Pral2908g00007 431 CDD ALDH_F6_MMSDH 1 412 IPR010061 GO:0004491
Pral2908g00007 431 Pfam Aldehyde dehydrogenase family 1 408 IPR015590 GO:0016491
Pral2908g00007 431 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 1 412 IPR010061 GO:0004491
Pral2908g00007 431 SUPERFAMILY ALDH-like 2 413 IPR016161 GO:0016491
Pral2908g00007 431 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 181 381 IPR016163 GO:0016620
Pral2908g00007 431 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 1 187 - -
Pral2908g00007 431 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 206 217 IPR016160 GO:0016491
Pral2908g00007 431 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 389 IPR016162 GO:0016491
Pral2908g00007 431 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 181 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2908g00007 Pral-Chr2908 93422 100180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2908g00007 1 396 Aldehyde Dehydrogenase Gene Family AT2G14170 82.576 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2908g00007 K00140 - gmx:100811544 804.283