LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2908g00005	ATGACGATGAAGATGCTATCTTCAATAATTTTCTTCCTCTTGATCATCCCTCATGCATTTTCCATATCCTTCAACTTCTCTAGTTTCAGTCCAAATGATAGAAACATATCGTACGAGGGATCATCTTACCCAGCACCACCATCCATCCAGTTAACAAGAAACCAGCAAGACCAATCCCTGAGGGCTAGTGTTGGTCGAGCCACATATTACCAACCAATGCGTTTATGGGATAGAGCCACTGGGAAGCTCACAGACTTCAGAACCCGTTTCACTTTTGTGATTCGTTCAAAGCCGAAAGTGCGGGGAGGTGGGTTGGCTTTCTTCTTAGCCCCTGCTGGTTCAAAGCTTCCCAATGTCACAAAAGGAGGCTCTATGGGTCTGACTCTCGATGACCAGCCATTAAATTCAACAGACAATCCGTTTGTTGCTGTGGAATTTGATATCTTTAAGAATGATTGGGATCCTCCGAAGGAACACGTTGGTGTCAATATCAATTCCATGAGATCTGTTAATAACTTGACGTGGTTGGCTGATATCAATGAAGGGAGAACTAATGAGGTTTTCATTAGTTACAGCACAAATACACAAAATCTAAGCATTTCCTTCACTGGCTTTGTTAATGGTACTATTGTGCAGCAACATCTTTATCAGATCGTCGATATGAGAAAGTATCTACCTGAATGGGTTACTTTTGGCTTCTCAGCTTCCACTAGAAATACTTCAGCAATACGTAAGATCAACTCATGGAGTTTCTTATCGAATAATGATGATTCGAATACTCCAAATGAGTTCTCAGAAACACCTTTTAACCCGAGCCAGAGCTCGAAGAGTAGAAAGAACAGGACAAAACTTGGAGTTGGATTAGGGGTTGGAGTGTTTATTTTAATTTGTGTGTTTAGTTTGGTTTTTGTAGGCTTGAAGAAGAAGAGAAGGAAGATGGAAGAGGATGATCATGAGTTTGATAAGCAAATGTATGACAGCTTTGGAAGAGGAATAGGACCAAAGGAGTACTCATATGCTGATCTAGCAAGTGCTACAAATTATTTTGAAGATGCACAGAAGTTAGGACAAGGAGGATTTGGGGAGGTTTATAGAGGTTTCCTCAAAGATTCAAACACCTGCATAGCCATAAAGAGAATATCAGAGGGCTCTAAACAAGGAATGAAGGAGTTTGCTTCGGAAGTAAGAATTATTAGTCAACTACGGCATCGAAATTTGGTGCAACTACTTGGTTGGTGTCATAAAGGGAAAGAACTATTGTTGGTTTATGAGTATATGCCAAATGGAAGTTTAGATTTTCATCTCTTCAAGGATCAAAGTTTGCTAAGATGGTCGGAAAGATTCAAAATAGCTCAAGGCTTGGCCTCTGCATTGTTATACCTGCATGAAGGATGGGAACGATGTGTTGTACATAGGGACATAAAGTCAAGCAATATCATGCTAGATTCTAACTTCAATGCAAAACTTGGAGATTTTGGTTTGGCCAGACTTGTAGACCACACGAAAAGTTCACCAACCACAGCTTTGGCAGGAACTATGGGCTATATGGCTCCTGAATGTCTTATTATTGGGAGGGCAAGCAAAGAATCCGATATGTATAGTTTTGGAATTGTTGCTTTGGAGATAGCTAGTGGAAGAAAGTGCATAAACCACAATGCTCCAGAAAATGAAATAAACGTGGTGAATTGGGTATGGGAACTATATGGAAGTGGGAGAATTCTTGAAGCAGTCGATCCAAGACTCCAAGGAGATTTTGACCATGATCAAATCAAATGTTTGATGATTGTTGGGCTATGGTGTGCTCATCCTGATCATAAGCATAGGCCTTCCATAAGGCAAGCGATGAATGTGCTTAACTTTGAAGTTCCATTTCCTAGTCTTCCATTAAGCTATCCAGAACTCACATATCATGAACTTCCTCCAGTGGGATCATCATCTTCAATTCCATCCACCACCAATGCTTCAGAGGTTAGTCAAAACTAG	1983	0.4054	MTMKMLSSIIFFLLIIPHAFSISFNFSSFSPNDRNISYEGSSYPAPPSIQLTRNQQDQSLRASVGRATYYQPMRLWDRATGKLTDFRTRFTFVIRSKPKVRGGGLAFFLAPAGSKLPNVTKGGSMGLTLDDQPLNSTDNPFVAVEFDIFKNDWDPPKEHVGVNINSMRSVNNLTWLADINEGRTNEVFISYSTNTQNLSISFTGFVNGTIVQQHLYQIVDMRKYLPEWVTFGFSASTRNTSAIRKINSWSFLSNNDDSNTPNEFSETPFNPSQSSKSRKNRTKLGVGLGVGVFILICVFSLVFVGLKKKRRKMEEDDHEFDKQMYDSFGRGIGPKEYSYADLASATNYFEDAQKLGQGGFGEVYRGFLKDSNTCIAIKRISEGSKQGMKEFASEVRIISQLRHRNLVQLLGWCHKGKELLLVYEYMPNGSLDFHLFKDQSLLRWSERFKIAQGLASALLYLHEGWERCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHTKSSPTTALAGTMGYMAPECLIIGRASKESDMYSFGIVALEIASGRKCINHNAPENEINVVNWVWELYGSGRILEAVDPRLQGDFDHDQIKCLMIVGLWCAHPDHKHRPSIRQAMNVLNFEVPFPSLPLSYPELTYHELPPVGSSSSIPSTTNASEVSQN	660

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2908g00005	660	ProSiteProfiles	Protein kinase domain profile.	349	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2908g00005	660	Gene3D	Phosphorylase Kinase; domain 1	334	425	-	-
	Pral2908g00005	660	FunFam	L-type lectin-domain containing receptor kinase IX.1	20	263	-	-
	Pral2908g00005	660	Pfam	Protein kinase domain	349	616	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2908g00005	660	CDD	lectin_legume_LecRK_Arcelin_ConA	31	254	IPR001220	GO:0030246
	Pral2908g00005	660	Gene3D	Transferase(Phosphotransferase) domain 1	426	635	-	-
	Pral2908g00005	660	SUPERFAMILY	Concanavalin A-like lectins/glucanases	21	254	IPR013320	-
	Pral2908g00005	660	MobiDBLite	consensus disorder prediction	259	280	-	-
	Pral2908g00005	660	PANTHER	-	51	622	-	-
	Pral2908g00005	660	ProSitePatterns	Protein kinases ATP-binding region signature.	355	378	IPR017441	GO:0005524
	Pral2908g00005	660	Pfam	Legume lectin domain	22	260	IPR001220	GO:0030246
	Pral2908g00005	660	CDD	STKc_IRAK	355	619	-	-
	Pral2908g00005	660	FunFam	L-type lectin-domain containing receptor kinase IX.1	334	425	-	-
	Pral2908g00005	660	Gene3D	-	20	265	-	-
	Pral2908g00005	660	SUPERFAMILY	Protein kinase-like (PK-like)	330	620	IPR011009	-
	Pral2908g00005	660	ProSitePatterns	Legume lectins alpha-chain signature.	225	234	IPR000985	-
	Pral2908g00005	660	SMART	serkin_6	349	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2908g00005	660	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	469	481	IPR008271	GO:0004672\|GO:0006468
	Pral2908g00005	660	FunFam	Lectin-domain containing receptor kinase A4.3	426	638	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2908g00005	Pral-Chr2908	76120	78530	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2908g00005	5	637	Receptor kinase-like Gene Family	AT5G10530	46.697	0.0	549

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pral2908g00005		Pkinase	6.5e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2908g00005	-		-	gmx:100817743	822.772