Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2908g00004 ATGACGATGAAGATGCTATCTTCAATAATTTTCTTCCTCTTCAACATCCCTCACGCATTTTCCATATCCTTCAACTTCTCTAGTTTCAGCCCAAATGATAGAAACATATCGTACGAGGGATCATCTTACCCAGCACCACCATCCATCCAGTTAACAAGAAACCAACAAGACCAATCCTTGACGGCTAGTGTTGGTCGAGCCACATATTACCAACCAATGCGTTTATGGGACAAAGCCACTGGGAACCTCACAGACTTCAGAACCCATTTCACTTTTGTGATTCGTTCAAAGCAGAAAGCATATGGAGATGGGTTGGCTTTCTTCTTAGCCCCTGCTGGTTCAAAGCTTCCCAATGTCACGAAAGGAGGTTCTATGGGTCTGACTCTTGATGACCAGCCATTAAATTCAACAGACAATCCATTTGTTGCTGTGGAGTTTGATATCTATAAGAATTATTGGGATCCTCCGAAAGAACATGTAGGTGTCAATATCAATTCCATGAGATCTGTTAATAACTTGACGTGGTTGGCTGATATCAATGGAGGGAGAACTAATGAGGTTTTCATCAGTTACAACTCAAATACACAAAATCTAAGCATTGTCTTCACTGGCTTTGTTAATGGTACTATTGTGCAGCAACATCTTTATCAAATAGTTGATATGAGAAAGTATCTACCTGAATGGGTTGCTTTTGGCTTCTCAGCTGCCACCGGAAGTACTTCAGCAATACATAAGATCAACTCATGGAGTTTCTTATCGAATAATGATGATTTGAATGCTCCAAATGAGTTCTCAGAAACACCTTTTAACCCGAGCACGAGCCCAAGCCCGAGCCAGAGCCCGAAGAGTAGAAATAACAGGACAAAACTTGGAGTTGGATTAGGTGTTGGAGGGTTTATTTTAATTTGTGTGTTTAGTTTGGCTTTTGTAGGCTTGAAGAAGAAGAAAAGGAAGATGGAAGAGGATGATCATGAGTTTGATGAGCAAATGTATGACAGCTTTGGAAGAGGAATAGGACCAAAGGAGTACTCATATGCTGATCTAGCAAGTGCTACAAATTATTTTGAAGATGCACAGAAGTTAGGACAAGGAGGATTTGGGGAGGTTTATAGAGGTTTCCTCAAAGATTCAAACACTTGCATAGCCATAAAGAGAATATCAGAGGGCTCTAAACAAGGAATGAAGGAGTTTGCTTCGGAAGTAAGAATTATTAGTCAACTACGGCATCGAAATTTGGTGCAACTACTTGGTTGGTGTCACAAAGGGAAAGAACTATTGTTAGTTTACGAGTATATGCCAAATGGAAGTTTAGATTTTCATCTCTTCAAGGATCAAAGTTTGCTAAAATGGTCAGAAAGATTCAAAATAGCTCAAGGCTTGGCCTCTGCATTGTTATACCTGCATGAAGGATGGGAACGATGTGTTGTTCATAGAGACATAAAGTCAAGCAATATCATGCTAGATTCTAACTTCAATGCAAAACTTGGAGATTTTGGGTTAGCAAGACTTGTAGACCACGCGAAAAGTTCTCCTACTACAGCTTTGGCAGGAACCATGGGCTATATGGCTCCTGAATGTCTTTTTATTGGGAGGGCAAGCAAAGAATCTGATATGTATAGTCTTGGAATTGTTGCTTTGGAGACAGCTTGTGGAAGAAAATGCATAAACCACAATGTTCCAGAAAATGAAATAAACATAGTGAATTGGGTATGGGAACTATATGGAAGTGGGAGAATTCTTGAAGCAGTCGATCCAAGACTCCAAGGAGATTTTGACCATGATCAAATCAAATGTTTGATGATTGTTGGGCTATGGTGTGCTCATCCTGATCATAATCATAGGCCTTCTATAAGGCAAGCAATGAATGTGCTCAACTTTGAAGTTCCATTTCCTAGTCTTCCATTAAGTTATCCAGAACTCACATATCATGAACTTCCTCCAGTGGGATCATCATCTTCAATTCCATCCACCACCAATGCTTCAAAGGTTAGCCAAAACTAG 2001 0.4003 MTMKMLSSIIFFLFNIPHAFSISFNFSSFSPNDRNISYEGSSYPAPPSIQLTRNQQDQSLTASVGRATYYQPMRLWDKATGNLTDFRTHFTFVIRSKQKAYGDGLAFFLAPAGSKLPNVTKGGSMGLTLDDQPLNSTDNPFVAVEFDIYKNYWDPPKEHVGVNINSMRSVNNLTWLADINGGRTNEVFISYNSNTQNLSIVFTGFVNGTIVQQHLYQIVDMRKYLPEWVAFGFSAATGSTSAIHKINSWSFLSNNDDLNAPNEFSETPFNPSTSPSPSQSPKSRNNRTKLGVGLGVGGFILICVFSLAFVGLKKKKRKMEEDDHEFDEQMYDSFGRGIGPKEYSYADLASATNYFEDAQKLGQGGFGEVYRGFLKDSNTCIAIKRISEGSKQGMKEFASEVRIISQLRHRNLVQLLGWCHKGKELLLVYEYMPNGSLDFHLFKDQSLLKWSERFKIAQGLASALLYLHEGWERCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHAKSSPTTALAGTMGYMAPECLFIGRASKESDMYSLGIVALETACGRKCINHNVPENEINIVNWVWELYGSGRILEAVDPRLQGDFDHDQIKCLMIVGLWCAHPDHNHRPSIRQAMNVLNFEVPFPSLPLSYPELTYHELPPVGSSSSIPSTTNASKVSQN 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2908g00004 666 FunFam L-type lectin-domain containing receptor kinase IX.1 340 431 - -
Pral2908g00004 666 FunFam L-type lectin-domain containing receptor kinase IX.1 20 263 - -
Pral2908g00004 666 Gene3D Phosphorylase Kinase; domain 1 340 431 - -
Pral2908g00004 666 Gene3D Transferase(Phosphotransferase) domain 1 432 641 - -
Pral2908g00004 666 PANTHER - 53 628 - -
Pral2908g00004 666 CDD lectin_legume_LecRK_Arcelin_ConA 31 254 IPR001220 GO:0030246
Pral2908g00004 666 Pfam Protein kinase domain 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2908g00004 666 FunFam Lectin-domain containing receptor kinase A4.3 432 644 - -
Pral2908g00004 666 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Pral2908g00004 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Pral2908g00004 666 CDD STKc_IRAK 361 625 - -
Pral2908g00004 666 ProSiteProfiles Protein kinase domain profile. 355 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2908g00004 666 Gene3D - 20 263 - -
Pral2908g00004 666 Pfam Legume lectin domain 22 257 IPR001220 GO:0030246
Pral2908g00004 666 SMART serkin_6 355 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2908g00004 666 ProSitePatterns Legume lectins alpha-chain signature. 225 234 IPR000985 -
Pral2908g00004 666 MobiDBLite consensus disorder prediction 262 287 - -
Pral2908g00004 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 254 IPR013320 -
Pral2908g00004 666 SUPERFAMILY Protein kinase-like (PK-like) 337 626 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2908g00004 Pral-Chr2908 53940 55976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2908g00004 5 643 Receptor kinase-like Gene Family AT5G10530 45.967 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral2908g00004 Pkinase 3.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2908g00004 - - gmx:100817743 848.195