LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2907g00002	ATGGCCGTCGTTCGTCAACGCCGCCAACTCAACCTTTGCCTAGTGCTGCCGGAGCCCTCCGATCATCGCCGTCTCTTCCCCTTGCCCACCGCTTCCTCTTCCACCGTCTTCTCCTCTGCTGCAGATGTCACTCCTAACGACATCGAAAAGCTTGAAGTTCTTGGCCACGGAAATGGTGGTACGGTCTACAAGGTTCGCCACAAGCGAACTTCTGCTATCTACGCTCTGAAGGTGGTCCCCAGCGGCTCCGACCCGATTACCTGCCGCCAGGTCCGGCGAGAGATGGACATCCTCCGACGGACGGACTCGCCTTATGTAGTACAATTCCACGGTTTCTTCGAGAAGCCGTCCGGCGATGTTGCGATTTTGCTAGAGTACATGGACTCGGGGACGCTGGACACTCTGCTAAAGAAAAACGGCACCTTCTCTGAATCCCAACTCGCGGCGGTGGCGCGTCAAGTTCTCAATGGGCTGAGCTATCTCCACGCGAACAACGTCATCCACCGCGACATCAAACCATCGAATCTTCTAGTGAATCAGAATATGGAAGTGAAGATCAGTGACTTCGGAGTCAGCAAGGTCATGTGCCGGACGTTGGACGCGTGCACTTCATACGTCGGTACATGCGCGTACATGAGCCCGGAAAGGTTCGACCCGGATAGATATGGAGGGAATTATAACGGGTATGCGGCTGATATATGGAGCTTGGGTCTCACGTTGTTTGAACTCTATGTGGGTCATTTTCCGTTTCTTCCGGCAGGTCAGAGACCCGATTGGGCCACCTTGATGTGTGCCATTTGTTTTGGCGATCCACCTACCTTGCCAGAGAGTGCGTCCGACGAGTTTCAGAGCTTCGTGCAGTGTTGCTTGAAGAAGGAATCAAACGAGAGGTTGACAGCATCTCAGCTTTTGACCCACCCATTTCTATGTCAACCATAA	939	0.5357	MAVVRQRRQLNLCLVLPEPSDHRRLFPLPTASSSTVFSSAADVTPNDIEKLEVLGHGNGGTVYKVRHKRTSAIYALKVVPSGSDPITCRQVRREMDILRRTDSPYVVQFHGFFEKPSGDVAILLEYMDSGTLDTLLKKNGTFSESQLAAVARQVLNGLSYLHANNVIHRDIKPSNLLVNQNMEVKISDFGVSKVMCRTLDACTSYVGTCAYMSPERFDPDRYGGNYNGYAADIWSLGLTLFELYVGHFPFLPAGQRPDWATLMCAICFGDPPTLPESASDEFQSFVQCCLKKESNERLTASQLLTHPFLCQP	312

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2907g00002	312	PANTHER	MITOGEN-ACTIVATED KINASE KINASE KINASE	40	310	-	-
	Pral2907g00002	312	SUPERFAMILY	Protein kinase-like (PK-like)	45	310	IPR011009	-
	Pral2907g00002	312	ProSiteProfiles	Protein kinase domain profile.	48	309	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2907g00002	312	FunFam	Mitogen-activated protein kinase 2	129	312	-	-
	Pral2907g00002	312	CDD	PKc_MAPKK_plant_like	46	309	-	-
	Pral2907g00002	312	Gene3D	Phosphorylase Kinase; domain 1	30	128	-	-
	Pral2907g00002	312	Gene3D	Transferase(Phosphotransferase) domain 1	130	312	-	-
	Pral2907g00002	312	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	166	178	IPR008271	GO:0004672\|GO:0006468
	Pral2907g00002	312	Pfam	Protein kinase domain	49	309	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2907g00002	312	SMART	serkin_6	48	309	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2907g00002	312	ProSitePatterns	Protein kinases ATP-binding region signature.	54	77	IPR017441	GO:0005524
	Pral2907g00002	312	FunFam	Mitogen-activated protein kinase kinase 1	29	128	-	-
	Pral2907g00002	312	PRINTS	Tyrosine kinase catalytic domain signature	231	253	IPR001245	GO:0004672\|GO:0006468
	Pral2907g00002	312	PRINTS	Tyrosine kinase catalytic domain signature	160	178	IPR001245	GO:0004672\|GO:0006468
	Pral2907g00002	312	PRINTS	Tyrosine kinase catalytic domain signature	124	137	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2907g00002	Pral-Chr2907	18180	19286	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2907g00002	1	309	MAP Kinase Kinase Gene Family	AT1G73500	62.258	5.17e-135	384

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE7	Pral2907g00002		Pkinase	1.6e-66	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2907g00002	K20604		-	qsa:O6P43_008459	499.975