Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2907g00001 ATGAGTGGTGAGAAAAGAGAAGAATATTCGACATCTGAGAAAGAGGAGAAGGAAGAAGAAGATATTGAAGAGAAAGATCATGAGATGCTCAAGGGCAGAATCTCTAACCATCCTCTTTATGACCTTCTTGTTCAGCAACACCTCAACTGTTTGAAGGTGGGTGAGGTTTCCAACTTTGAAAAAGTGAAGAAGAAGAAAGAGAGGAATAAGAAAGCATCAATGAAGCAAAACTTGGGCATGCTTAGTCATTCAGAGCTCGATCACTTCATGGAAGCATATTGTGTGGCGCTAGGGAAGCTGAAAGAAGCAATGGAGGAGCCTCAAACAGAGTCACTGGCTTTCATCAACAACATGCATTCTCAACTCAGAGACCTTGCTGGATTAACCCTCTCTCCTTCTTCCTCTTCCTCTAACCTCCAAACACATCCTTGA 432 0.4259 MSGEKREEYSTSEKEEKEEEDIEEKDHEMLKGRISNHPLYDLLVQQHLNCLKVGEVSNFEKVKKKKERNKKASMKQNLGMLSHSELDHFMEAYCVALGKLKEAMEEPQTESLAFINNMHSQLRDLAGLTLSPSSSSSNLQTHP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2907g00001 143 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 10 128 - -
Pral2907g00001 143 SMART KNOX1_2 28 68 IPR005540 GO:0003677|GO:0005634
Pral2907g00001 143 SMART KNOX2_2 76 127 IPR005541 GO:0003677|GO:0005634
Pral2907g00001 143 MobiDBLite consensus disorder prediction 1 30 - -
Pral2907g00001 143 Pfam KNOX2 domain 84 125 IPR005541 GO:0003677|GO:0005634
Pral2907g00001 143 Pfam KNOX1 domain 30 54 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2907g00001 Pral-Chr2907 11960 13482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2907g00001 26 122 Homeobox Transcription Factor Family AT4G08150 34.653 1.18e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2907g00001 - - gmx:100805160 141.354