Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2906g00007 ATGTTAATGAATCTCCAAACAGCAACTCCCAGAATCACTGGCTTCTCTGTAGCTACCAAGACACAAGTTCCTAATAATGGTCCAACTATTTATGCGTTCGGTCAATGTATTGAAACTATCACTCAGATTGGCTGCAAGGATTGCTTGAATGCTCAGTACAACAATATGCAGTCTTGTCTTCCCAATTCAGATGGTAGGGCTTTTGCTAATGGCTGTTTCTTGAGATATTCCACCACTTCCTTCTTCCCCCATAATCAGATCCTCGATGTCACACGCTTCTCAAAACAAGCAGTTACAAGCAAGAAGGGGATCATTATTGGTGGAGTTGTTGCAGGTGGATCTCTTGCTTTGATCCTCATTGCATTATTTTCCATGATTAGGAGACGAAAAAGCCCCAAGATGATCAGTATTCCTAGAGGAGACATACCTGGAGCAAGCAAGCTAAAAGGCCCAGTTGCTTTTAGTTACAATGTTTTGAAGACCGCAACCAAGAATTTTAGTGAAGAAAATAAAATAGGAGAAGGTGGATTTGGCGTGGTATACAAGGGCACTTTGTGGAATGGGAAAGTAGTTGCGATCAAAAAATTAGCTTCACCCTACTCCAACAAAGTAGATGAAGAATTTGAAAGTGAAGTGAAGCTGATAAGTCATGTCCATCATCGGAATCTTGTTCGACTTTTGGGATGTTGTAGTAAAGGCCATGACAGAATTCTTGTTTATGAGTACATGAAAAACAATAGCCTCGACAAATTTTTATATGGTGACAAGAAATACTCTCTCAACTGGAAGCAACGATATGAAGTCATTTTAGGAATAGCAAGGGGTTTGGCTTATCTACATGAAGAGTTTCATGTTCGCATTATACATAGAGATATAAAGACTAACAATATCCTCTTAGATGATGATCTACAACCTAGAATTGCTGATTTTGGCTTGGCAAGGCTTATACCTGAGGATAAAACTCATCTTAACACAAAATTTGCAGGCACATTAGGATACACGTCACCGGAGTATGCAATTCATGGCCAACTATCAGAAAAAGTTGATGTCTACAGCTATGGTATTGTAGTGTTAGAAATAATCAGTGGTCAGAAGTGCAATAAATTAGAGACCGATGGTGATGTTGCAGGCGAATACCTCCTCCAAAAAGCTTGGAATTTATATGAGAGGGGTATGCACTTAGAGTTGGTGGATAATGCCTTAGACCCTCAAGATTATGATGCAGATGAAGTCAAGAAAATTATAGAGATTGGTTTGCTTTGCACCCAACCATCTGCAGAAACAAGGCCAATGATGTCTGAAATAATGGTTATGCTCAAGAAGAAGGGTTTATTAGAGAATATGAGGCCAACTATGCCTATCTTCATTGAAACTAATTAA 1380 0.3913 MLMNLQTATPRITGFSVATKTQVPNNGPTIYAFGQCIETITQIGCKDCLNAQYNNMQSCLPNSDGRAFANGCFLRYSTTSFFPHNQILDVTRFSKQAVTSKKGIIIGGVVAGGSLALILIALFSMIRRRKSPKMISIPRGDIPGASKLKGPVAFSYNVLKTATKNFSEENKIGEGGFGVVYKGTLWNGKVVAIKKLASPYSNKVDEEFESEVKLISHVHHRNLVRLLGCCSKGHDRILVYEYMKNNSLDKFLYGDKKYSLNWKQRYEVILGIARGLAYLHEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLARLIPEDKTHLNTKFAGTLGYTSPEYAIHGQLSEKVDVYSYGIVVLEIISGQKCNKLETDGDVAGEYLLQKAWNLYERGMHLELVDNALDPQDYDADEVKKIIEIGLLCTQPSAETRPMMSEIMVMLKKKGLLENMRPTMPIFIETN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2906g00007 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Pral2906g00007 459 FunFam Cysteine-rich receptor-like protein kinase 2 243 447 - -
Pral2906g00007 459 ProSiteProfiles Protein kinase domain profile. 166 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2906g00007 459 Gene3D Phosphorylase Kinase; domain 1 142 242 - -
Pral2906g00007 459 Gene3D - 1 81 IPR038408 -
Pral2906g00007 459 Gene3D Transferase(Phosphotransferase) domain 1 243 449 - -
Pral2906g00007 459 ProSiteProfiles Gnk2-homologous domain profile. 1 81 IPR002902 -
Pral2906g00007 459 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 457 - -
Pral2906g00007 459 SUPERFAMILY Protein kinase-like (PK-like) 148 439 IPR011009 -
Pral2906g00007 459 SMART serkin_6 166 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2906g00007 459 FunFam Cysteine-rich receptor-like protein kinase 2 134 242 - -
Pral2906g00007 459 Pfam Salt stress response/antifungal 15 78 IPR002902 -
Pral2906g00007 459 CDD STKc_IRAK 172 441 - -
Pral2906g00007 459 ProSitePatterns Protein kinases ATP-binding region signature. 172 195 IPR017441 GO:0005524
Pral2906g00007 459 Pfam Protein tyrosine and serine/threonine kinase 169 438 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2906g00007 Pral-Chr2906 58684 63284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2906g00007 100 440 Receptor kinase-like Gene Family AT1G56120 48.094 3.72e-102 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2906g00007 PK_Tyr_Ser-Thr 3.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2906g00007 - - gmx:100813585 620.542