Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2906g00006 ATGTTAATGAATCTCCAAACAGCAACTCCCAGAATCACTGGCTTCTCTGTAGCTACCAAGACACAAGTTCCTAATAATGGTCCAACTATTTATGCGTTCGGTCAATGTATTGAAACTATCACTCAGATTGGCTGCAAGGATTGCTTGAATGCTCAGTACAACAATATGCAGTCTTGTCTTCCCAATTCAGATGGTAGGGCTTTTGCTAATGGCTGTTTCTTGAGATATTCCACCACTTCCTTCTTCCCCCATAATCAGATCCTCGATGTCACACGCTTCTCAAAACAAGTTACAAGCAAGAAGGGGATCATTATTGGTGGAGTTGTTGCAGGTGGATCTCTTGCTTTGATCCTCATTGCATTATTTTCCATGATTAGGAGACGAAAAAGCCCCAAGATGATCAGTATTCCTAGAGGAGACATACCTGGAGCAAGCAAGCTAAAAGGCCCAGTTGCTTTTAGTTACAATGTTTTGAAGACCGCAACCAAGAATTTTAGTGAAGAAAATAAAATAGGAGAAGGTGGATTTGGCGTGGTATACAAGGGCACTTTGTGGAATGGGAAAGTAGTTGCGATCAAAAAATTAGCTTCACCCTACTCCAACAAAGTAGATGAAGAATTTGAAAGTGAAGTGAAGCTGATAAGTCATGTCCATCATCGGAATCTTGTTCGACTTTTGGGATGTTGTAGTAAAGGCCATGACAGAATTCTTGTTTATGAGTACATGAAAAACAATAGCCTCGACAAATTTTTATATGGTGACAAGAAATACTCTCTCAACTGGAAGCAACGATATGAAGTCATTTTAGGAATAGCAAGGGGTTTGGCTTATCTACATGAAGAGTTTCATGTTCGCATTATACATAGAGATATAAAGACTAACAATATCCTCTTAGATGATGATCTACAACCTAGAATTGCTGATTTTGGCTTGGCAAGGCTTATACCTGAGGATAAAACTCATCTTAACACAAAATTTGCAGGCACATTAGGATACACGTCACCGGAGTATGCAATTCATGGCCAACTATCAGAAAAAGTTGATGTCTACAGCTATGGTATTGTAGTGTTAGAAATAATCAGTGGTCAGAAGTGCAATAAATTAGAGACCGATGGTGATGTTGCAGGCGAATACCTCCTCCAAAAAGCTTGGAATTTATATGAGAGGGGTATGCACTTAGAGTTGGTGGATAATGCCTTAGACCCTCAAGATTATGATGCAGATGAAGTCAAGAAAATTATAGAGATTGGTTTGCTTTGCACCCAACCATCTGCAGAAACAAGGCCAATGATGTCTGAAATAATGGTTATGCTCAAGAAGAAGGGTTTATTAGAGAATATGAGGCCAACTATGCCTATCTTCATTGAAACTAATTAA 1377 0.3907 MLMNLQTATPRITGFSVATKTQVPNNGPTIYAFGQCIETITQIGCKDCLNAQYNNMQSCLPNSDGRAFANGCFLRYSTTSFFPHNQILDVTRFSKQVTSKKGIIIGGVVAGGSLALILIALFSMIRRRKSPKMISIPRGDIPGASKLKGPVAFSYNVLKTATKNFSEENKIGEGGFGVVYKGTLWNGKVVAIKKLASPYSNKVDEEFESEVKLISHVHHRNLVRLLGCCSKGHDRILVYEYMKNNSLDKFLYGDKKYSLNWKQRYEVILGIARGLAYLHEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLARLIPEDKTHLNTKFAGTLGYTSPEYAIHGQLSEKVDVYSYGIVVLEIISGQKCNKLETDGDVAGEYLLQKAWNLYERGMHLELVDNALDPQDYDADEVKKIIEIGLLCTQPSAETRPMMSEIMVMLKKKGLLENMRPTMPIFIETN 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2906g00006 458 CDD STKc_IRAK 171 440 - -
Pral2906g00006 458 ProSiteProfiles Protein kinase domain profile. 165 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2906g00006 458 FunFam Cysteine-rich receptor-like protein kinase 2 133 241 - -
Pral2906g00006 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Pral2906g00006 458 SMART serkin_6 165 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2906g00006 458 Pfam Protein tyrosine and serine/threonine kinase 168 437 IPR001245 GO:0004672|GO:0006468
Pral2906g00006 458 ProSitePatterns Protein kinases ATP-binding region signature. 171 194 IPR017441 GO:0005524
Pral2906g00006 458 Gene3D - 1 81 IPR038408 -
Pral2906g00006 458 FunFam Cysteine-rich receptor-like protein kinase 2 242 446 - -
Pral2906g00006 458 ProSiteProfiles Gnk2-homologous domain profile. 1 81 IPR002902 -
Pral2906g00006 458 Gene3D Transferase(Phosphotransferase) domain 1 242 448 - -
Pral2906g00006 458 SUPERFAMILY Protein kinase-like (PK-like) 147 438 IPR011009 -
Pral2906g00006 458 Pfam Salt stress response/antifungal 15 78 IPR002902 -
Pral2906g00006 458 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 456 - -
Pral2906g00006 458 Gene3D Phosphorylase Kinase; domain 1 141 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2906g00006 Pral-Chr2906 58684 63284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2906g00006 99 439 Receptor kinase-like Gene Family AT1G56120 48.094 3.21e-102 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2906g00006 PK_Tyr_Ser-Thr 3.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2906g00006 - - gmx:100813585 619.387