Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2906g00002 ATGCCAGACTCAAATGCTAAGATTTTTTATGCTGGTTGCTTCATGAGATACTCCACCTCTGCATTTTTTACTGCTAACCAGACCACTGATATCAAACGCATCTTGAAACAAGGAGATTCAAGCAAGAAGACCATTATTGGTGGGGTCGTTGGAGGTGCATCTTTTATTTTGATTCTTCTTGCATTATTTGCTTTGTATAGACGATCATTGTTCAAGAGAGTTCATAGAGTTGACATTTTGGGAGCAACTGAGTTGAAAGGCCCGGTTAACTACAGGTATAAAGATCTGAAGTCTGCGACAAAAAATTTCAGTGAAGAGAATAAATTAGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAGAAGTAATTGCCATAAAGAAATTGGCTCTAGAGCAATCCAAAAAGATGGATGAAGATTTTGAAAGTGAAGTGAAGCTAATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTTGGATGTTGCAGTAAAGGCCAAGAGAGATTCCTTGTCTATGAGTACATGAAGAACAACAATGTTGGCCAGTTCTTATTTGGTGGAGATAGAGGTTCTCTCAATTGGAAGCAACGTTATGGTATAATTTTAGGCACTGCAAGGGGTTTGGCATATCTTCATGAGGGATTCCACATTTGCATCGTACATAGGGATATAAAGCCCAGCAACATCCTCTTGGATGATGATTTCCAGCCTAAAATTGCAGATTTTGGATTGGCAAGGCTTTTGCCAAGGGACCAATCTCATCTCAATACAAAATTTGCAGGAACAATGGGATACACTGCACCTGAGTATGTAATGCATGGACAATTATCTGAGAAGGTTGACACCTATTGCTATGGTGTTGTAGTCTTAGAAATTATAAGTGGGCAAAAGAGTGGTGAATTAAAGAATGATGATCAAGGCGAATTCCTTCTTCAAAGAGCTTGGAAACTGTACGAGAGAGGAATGCACATGGAGTTTGTGGATGAAACCTTAGATCCAAATGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGATTGCTTTGCACGCAAGCATCTCCTGCAGCAAGGCCAACAATGTTTGAAGTTGTTGATATGATCGAAAGCAAAGGTGGCTTAATAGATCACAAGCGACCCACTATGCCTGTTTATGTTGATTCTAATGTGGGGATTAGAAGAGATGGTTAG 1209 0.3921 MPDSNAKIFYAGCFMRYSTSAFFTANQTTDIKRILKQGDSSKKTIIGGVVGGASFILILLALFALYRRSLFKRVHRVDILGATELKGPVNYRYKDLKSATKNFSEENKLGEGGFGDVYKGTLKNGEVIAIKKLALEQSKKMDEDFESEVKLISNVHHRNLVRLLGCCSKGQERFLVYEYMKNNNVGQFLFGGDRGSLNWKQRYGIILGTARGLAYLHEGFHICIVHRDIKPSNILLDDDFQPKIADFGLARLLPRDQSHLNTKFAGTMGYTAPEYVMHGQLSEKVDTYCYGVVVLEIISGQKSGELKNDDQGEFLLQRAWKLYERGMHMEFVDETLDPNEYDAEEVKKIIEIGLLCTQASPAARPTMFEVVDMIESKGGLIDHKRPTMPVYVDSNVGIRRDG 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2906g00002 402 Gene3D Phosphorylase Kinase; domain 1 70 179 - -
Pral2906g00002 402 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 3 393 - -
Pral2906g00002 402 FunFam Cysteine-rich receptor-like protein kinase 2 180 381 - -
Pral2906g00002 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Pral2906g00002 402 FunFam Cysteine-rich receptor-like protein kinase 2 71 179 - -
Pral2906g00002 402 Pfam Protein kinase domain 104 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2906g00002 402 Gene3D Transferase(Phosphotransferase) domain 1 180 385 - -
Pral2906g00002 402 CDD STKc_IRAK 109 375 - -
Pral2906g00002 402 SUPERFAMILY Protein kinase-like (PK-like) 87 374 IPR011009 -
Pral2906g00002 402 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Pral2906g00002 402 ProSiteProfiles Protein kinase domain profile. 103 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2906g00002 402 SMART serkin_6 103 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2906g00002 Pral-Chr2906 29204 49467 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2906g00002 1 402 Receptor kinase-like Gene Family AT1G70520 40.431 7.01e-98 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2906g00002 Pkinase 3.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2906g00002 - - gmx:100813585 573.163