Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2901g00012 ATGATCCGAGAGCCAGTCCCCTTCGTCCTCCCTAGCCTTCGAATTCCTCCATGGCTATCTGATAATTCACCGGCCGCCTCACCTTCCCCCTCTTCATTCCCAACCAACACCGATGCCGGCGCCGCCGACTCCTCCGTCCTCCTCTTCCACCCACTTCTTTCCAATGACTGTACCCTCCCGGAACTGCACTCGCTTGCTCAAGACTTTGACATGCCCTTTGATGTTTTCTCCAGCGATCAGTTCCGCATGTTCGAGTTCAAGATCCGCAAGTGTCCACGTGGCGGCAGGTCGCATGACTGGACCCGCTGTCCCTTTGCCCATCCCGGCGAGAAGGCTCGCCGAAGAGACCCTCGCAAATTCCCCTACTCCGCCACCCCTTGCCCTCACTTTCGCCATGCAAATTGCAACAAAAGTGACTCCTGCGATTTCGCTCACGGAGTCTTCGAATGCTGGCTTCATCCTTCTCGCTATAGAACTCAGCTCTGCAAAGATGGAGCAAATTGTCGCCGTCGAGTCTGTTTCTTTGCCCACACTCCCGATCAATTGCGTGTACCCACTCGCGGCTCCCTCGAAGCATCGGTCGGGTCGCCGATTCGTCGCTCTCTGGATTCATCGCGGAGCAGCTCTTCATTTATTTCGTCACCAACTTCTGTCCTTACTCCATCGCTACAAGACAGCTTACACTTGTCGCCGGGCAATTCCCAATATGCCGGTAACACATACAATGCGATGAGTGAAATAGTAACTTCAATGCGTAATGTGCAGCTTGATTCAAACACGATGGTTTCTGGTTTTGGTTCTCCCCGTGGTTCGTTTCTCCGACCTGGCCTTTCCAGCCCTCAGTCGACCCCAACGTGGGCTAGAACTGATAAATCTGGACCCGGTTCAGCGGACCTAGGGGATAGTGGCCACGAAGAAGAGGCTCCCATGGAGAGGGTGGAATCAGGAAGAGACCTCAGAGCCAAAATCTATGCCAAACTCAGCAATAAAATCTCATACGTGCGAAGCGACGCGCCTGCATCGGCTCCTGATTTTGGATGGGTTTCCGAACTGGTGAAGTGA 1062 0.5395 MIREPVPFVLPSLRIPPWLSDNSPAASPSPSSFPTNTDAGAADSSVLLFHPLLSNDCTLPELHSLAQDFDMPFDVFSSDQFRMFEFKIRKCPRGGRSHDWTRCPFAHPGEKARRRDPRKFPYSATPCPHFRHANCNKSDSCDFAHGVFECWLHPSRYRTQLCKDGANCRRRVCFFAHTPDQLRVPTRGSLEASVGSPIRRSLDSSRSSSSFISSPTSVLTPSLQDSLHLSPGNSQYAGNTYNAMSEIVTSMRNVQLDSNTMVSGFGSPRGSFLRPGLSSPQSTPTWARTDKSGPGSADLGDSGHEEEAPMERVESGRDLRAKIYAKLSNKISYVRSDAPASAPDFGWVSELVK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2901g00012 353 MobiDBLite consensus disorder prediction 274 290 - -
Pral2901g00012 353 PANTHER UNKEMPT FAMILY MEMBER 67 353 IPR045234 -
Pral2901g00012 353 MobiDBLite consensus disorder prediction 300 317 - -
Pral2901g00012 353 Coils Coil 352 353 - -
Pral2901g00012 353 ProSiteProfiles Zinc finger C3H1-type profile. 121 148 IPR000571 GO:0046872
Pral2901g00012 353 SMART c3hfinal6 121 147 IPR000571 GO:0046872
Pral2901g00012 353 SMART c3hfinal6 156 179 IPR000571 GO:0046872
Pral2901g00012 353 MobiDBLite consensus disorder prediction 198 226 - -
Pral2901g00012 353 MobiDBLite consensus disorder prediction 188 226 - -
Pral2901g00012 353 MobiDBLite consensus disorder prediction 265 317 - -
Pral2901g00012 353 Gene3D - 121 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2901g00012 Pral-Chr2901 76839 78270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2901g00012 70 189 C2H2 Transcription Factor Family AT5G12850 62.295 1.50e-51 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral2901g00012 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2901g00012 - - pcin:129298135 526.168