Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2901g00002 ATGGGGGGTCATGAAAACACCGTGGAGTTTCAACACCGAAACGAGGGCATTCTGAGTCGTCCGGTATCGGGTTTGGACACCAATGTTTCAGATTTAAGCAATCCTTTTCTTGGTTCATCTGCCTGGGATCCACTTTTTCCATTGAGTCAGACTCACAGCTTTGGGGGCTCATCATTGGTTTCACATAGTGACTTTGCTAACTCTTCTTACCCGAGTGTCTTGGAAAATCAGGGAATGAGTAACTCCTCTCACCCTGTTCACTATATGTCTGACTCAAATTTTGCTGATATGATCCCGAAGATCCCTCCCTATGGAAATGGCGATATAGCTAGTGCAGGATATGCGTCAAATTATAATCCAAATAAGGAAGCAGGCATTGGAATGGCTCCAATAAATGATGCACAATTGCTGGGTGAGCATTCCACTCCTGAAGAGGGAGGCACGTCTTCACCTAGTGGAAATAGAAGAAAACGAGGGCTTGATCATAATCCTACATTCAATCCAAGTAAGAGTGCTGAAGGGGAAGCACTCAAGGGTTCATCAGGGAAAAGCTTAGATGGCTTGAAAGAACAAGATGATAAGAAGCCAAAATCTGATCAAAATACAAGTCCAGATTTGCGTGGTAAGCAATCAGTGAAGCAACCTAAGGACAACTCTCAGAGTGAAGACGCTCCCAAAGACAATTTCATCCATGTGAGAGCTCGGAGAGGTCAAGCTACAAACAGTCATAGCCTTGCAGAAAGGATAAGAAGAGAAAAGATAAGTGAGAGAATGAAGTTACTCCAAGAACTTGTTCCTGGATGCAACAAGATAACTGGCAAAGCAGTAATGCTTGATGAGATTATTAACTATGTGCAATCACTTCAACAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACCGTGAACCCTGAACTGAATCTTGATGCAGAGCGGATCCTATCCAAAGATATTCTGCAGTCCCGCATCGGACATGGAGTTATTGGCGGATATGGAGGCGGTGTCATCGGCTCAAATCACCTATTTCTCGGTGGAGGTTTTCAGGGGACCCTGGGAAGCATACCCAGCACATCACAAAATATCCCTCCTTTGCCTCAGAGTGTTATGGATCCTGAACTCCAGAGCATATATGGAATGGGATACGATTCTAACTCAGCTCCTCAAAATTTGGGACCACAAACAGGGCGGTAG 1191 0.4458 MGGHENTVEFQHRNEGILSRPVSGLDTNVSDLSNPFLGSSAWDPLFPLSQTHSFGGSSLVSHSDFANSSYPSVLENQGMSNSSHPVHYMSDSNFADMIPKIPPYGNGDIASAGYASNYNPNKEAGIGMAPINDAQLLGEHSTPEEGGTSSPSGNRRKRGLDHNPTFNPSKSAEGEALKGSSGKSLDGLKEQDDKKPKSDQNTSPDLRGKQSVKQPKDNSQSEDAPKDNFIHVRARRGQATNSHSLAERIRREKISERMKLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDAERILSKDILQSRIGHGVIGGYGGGVIGSNHLFLGGGFQGTLGSIPSTSQNIPPLPQSVMDPELQSIYGMGYDSNSAPQNLGPQTGR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2901g00002 396 MobiDBLite consensus disorder prediction 185 202 - -
Pral2901g00002 396 CDD bHLH_AtBPE_like 228 313 - -
Pral2901g00002 396 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 150 353 IPR024097 GO:0006355
Pral2901g00002 396 Pfam Helix-loop-helix DNA-binding domain 241 289 IPR011598 GO:0046983
Pral2901g00002 396 SMART finulus 244 294 IPR011598 GO:0046983
Pral2901g00002 396 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 238 288 IPR011598 GO:0046983
Pral2901g00002 396 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 236 305 IPR036638 GO:0046983
Pral2901g00002 396 FunFam Basic helix-loop-helix transcription factor 235 307 - -
Pral2901g00002 396 MobiDBLite consensus disorder prediction 138 246 - -
Pral2901g00002 396 Gene3D - 235 310 IPR036638 GO:0046983
Pral2901g00002 396 MobiDBLite consensus disorder prediction 219 233 - -
Pral2901g00002 396 MobiDBLite consensus disorder prediction 203 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2901g00002 Pral-Chr2901 3235 6903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2901g00002 33 384 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 43.137 4.63e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral2901g00002 HLH 7.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2901g00002 - - gmx:100801930 478.404