Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2901g00002 | ATGGGGGGTCATGAAAACACCGTGGAGTTTCAACACCGAAACGAGGGCATTCTGAGTCGTCCGGTATCGGGTTTGGACACCAATGTTTCAGATTTAAGCAATCCTTTTCTTGGTTCATCTGCCTGGGATCCACTTTTTCCATTGAGTCAGACTCACAGCTTTGGGGGCTCATCATTGGTTTCACATAGTGACTTTGCTAACTCTTCTTACCCGAGTGTCTTGGAAAATCAGGGAATGAGTAACTCCTCTCACCCTGTTCACTATATGTCTGACTCAAATTTTGCTGATATGATCCCGAAGATCCCTCCCTATGGAAATGGCGATATAGCTAGTGCAGGATATGCGTCAAATTATAATCCAAATAAGGAAGCAGGCATTGGAATGGCTCCAATAAATGATGCACAATTGCTGGGTGAGCATTCCACTCCTGAAGAGGGAGGCACGTCTTCACCTAGTGGAAATAGAAGAAAACGAGGGCTTGATCATAATCCTACATTCAATCCAAGTAAGAGTGCTGAAGGGGAAGCACTCAAGGGTTCATCAGGGAAAAGCTTAGATGGCTTGAAAGAACAAGATGATAAGAAGCCAAAATCTGATCAAAATACAAGTCCAGATTTGCGTGGTAAGCAATCAGTGAAGCAACCTAAGGACAACTCTCAGAGTGAAGACGCTCCCAAAGACAATTTCATCCATGTGAGAGCTCGGAGAGGTCAAGCTACAAACAGTCATAGCCTTGCAGAAAGGATAAGAAGAGAAAAGATAAGTGAGAGAATGAAGTTACTCCAAGAACTTGTTCCTGGATGCAACAAGATAACTGGCAAAGCAGTAATGCTTGATGAGATTATTAACTATGTGCAATCACTTCAACAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACCGTGAACCCTGAACTGAATCTTGATGCAGAGCGGATCCTATCCAAAGATATTCTGCAGTCCCGCATCGGACATGGAGTTATTGGCGGATATGGAGGCGGTGTCATCGGCTCAAATCACCTATTTCTCGGTGGAGGTTTTCAGGGGACCCTGGGAAGCATACCCAGCACATCACAAAATATCCCTCCTTTGCCTCAGAGTGTTATGGATCCTGAACTCCAGAGCATATATGGAATGGGATACGATTCTAACTCAGCTCCTCAAAATTTGGGACCACAAACAGGGCGGTAG | 1191 | 0.4458 | MGGHENTVEFQHRNEGILSRPVSGLDTNVSDLSNPFLGSSAWDPLFPLSQTHSFGGSSLVSHSDFANSSYPSVLENQGMSNSSHPVHYMSDSNFADMIPKIPPYGNGDIASAGYASNYNPNKEAGIGMAPINDAQLLGEHSTPEEGGTSSPSGNRRKRGLDHNPTFNPSKSAEGEALKGSSGKSLDGLKEQDDKKPKSDQNTSPDLRGKQSVKQPKDNSQSEDAPKDNFIHVRARRGQATNSHSLAERIRREKISERMKLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDAERILSKDILQSRIGHGVIGGYGGGVIGSNHLFLGGGFQGTLGSIPSTSQNIPPLPQSVMDPELQSIYGMGYDSNSAPQNLGPQTGR | 396 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2901g00002 | 396 | MobiDBLite | consensus disorder prediction | 185 | 202 | - | - | |
Pral2901g00002 | 396 | CDD | bHLH_AtBPE_like | 228 | 313 | - | - | |
Pral2901g00002 | 396 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 150 | 353 | IPR024097 | GO:0006355 | |
Pral2901g00002 | 396 | Pfam | Helix-loop-helix DNA-binding domain | 241 | 289 | IPR011598 | GO:0046983 | |
Pral2901g00002 | 396 | SMART | finulus | 244 | 294 | IPR011598 | GO:0046983 | |
Pral2901g00002 | 396 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 238 | 288 | IPR011598 | GO:0046983 | |
Pral2901g00002 | 396 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 236 | 305 | IPR036638 | GO:0046983 | |
Pral2901g00002 | 396 | FunFam | Basic helix-loop-helix transcription factor | 235 | 307 | - | - | |
Pral2901g00002 | 396 | MobiDBLite | consensus disorder prediction | 138 | 246 | - | - | |
Pral2901g00002 | 396 | Gene3D | - | 235 | 310 | IPR036638 | GO:0046983 | |
Pral2901g00002 | 396 | MobiDBLite | consensus disorder prediction | 219 | 233 | - | - | |
Pral2901g00002 | 396 | MobiDBLite | consensus disorder prediction | 203 | 218 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2901g00002 | Pral-Chr2901 | 3235 | 6903 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2901g00002 | 33 | 384 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G10120 | 43.137 | 4.63e-73 | 231 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Pral2901g00002 | HLH | 7.9e-07 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2901g00002 | - | - | gmx:100801930 | 478.404 |