Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral289g00027 ATGGAAGTGGTCACAGCGGTTGCTAAACATGGGCTTGCAGCTCATGCCAGTGTTGCCATTAGAGCTGATCAGAAGAGTTACAGTTACAAGCAGCTCATATCTTCTGCGCAGGAGATATCCAATCTCTTATGTGGAAATGACATGAAATCAGGAAATCTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAGTTTGTTGCTGCAATACTAGGGACGTGGCTTAGTGGAGGTGTTGCCGTGCCACTAGCACTGAGCTATCCGGAAACAGAGCTATTGTATGTGATGAATAACGCGGATGTGTCCGCAATATTGAGTACTGAAGATCATAGTCAAACAATGCAAAGTGTTGCCATTAAAAGCTCTTCTCAGTTTTTTCTTATTCCTCCTGTTCCCAATAAATCCTCGGAGAAGAGCAGAGATGAAGATTCACAAAATAAAGAAATGCAGGCAGAAAGAGTTCACCAGGGGAATATCAAAAGAACAAGTGAAGATCCAGCATTGATATTGTACACCAGTGGGACGACAGGTAAACCTAAGGGAGTCGTTCACACACATCGAAGTATCAGTGCACAGGTTCAAACCTTGACAGAAGCATGGGGATACACTTCTACTGATCAATTTCTGCACTGTCTGCCTCTCCACCATGTTCATGGACTTTTCAATGCTTTGTTGGCCCCACTTTATGCAGGTTCCACGGTGGACTTTATGCCCAAATTTAGCGTGAGAGGAATCTGGCAGAGATGGCGTGAATCCTATCCAGTTGAAGGAACGAAGGCTGAGGATGCTATTACTGTGTTCACTGGAGTTCCAACTATTTATACAAGGTTGATACAGGGTTACCAAGCAATGGACCCTCAGTCACAAGCTGCTTCAGCTGCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCGCTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGGCTGTTGGAGCGATATGGCATGACCGAATTTGTCATGGCAATATCAAATCCGTTGAAAGGTGAGCGGAAGGCAGGCACTGTTGGCAAACCTTTTCCTGGTGTGCAGGTCAAGATTCTTGCAGACGAGGAGAGTGAAAGTAATGTAAATAAAGTGGGTGAGCTTTGCATTAAAAGCCCATCGTTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGGAATCATTCATTGATGATGGCTTCTTCAAAACTGGAGATGCAGTTACTACGGATCAAGATGGGTATTACATCATTTTAGGACGTACCAATGCGGATATAATGAAGGTTGGTGGCTACAAATTATCTGCACTAGAAATTGAATCAGTTATACTAGAGAACCCAGCTGTGTCAGAATGTTGCGTGTTGGGCTTACCTGACAAAGCTTACGGAGAAGTAGTTTGTGCAATTATTGTGCCAGAGGCCGAGTCTAAGAGAAAGAGAGAGGAAGAGTCAAAACCTGCTCTAACCTTAGAAGAATTATCCTCCTGGGCCAAAGACAGACTTGCACCTTACAAGATACCCACTCGATTGTTCCTTTGGGACTCTCTTCCTCGTAATGCAATGGGGAAGGTCAACAAAAAAGAGTTGAAGAAATTGCTGGCTGAGGAGCAGTAA 1632 0.4449 MEVVTAVAKHGLAAHASVAIRADQKSYSYKQLISSAQEISNLLCGNDMKSGNLGGARIGIVAKPSAEFVAAILGTWLSGGVAVPLALSYPETELLYVMNNADVSAILSTEDHSQTMQSVAIKSSSQFFLIPPVPNKSSEKSRDEDSQNKEMQAERVHQGNIKRTSEDPALILYTSGTTGKPKGVVHTHRSISAQVQTLTEAWGYTSTDQFLHCLPLHHVHGLFNALLAPLYAGSTVDFMPKFSVRGIWQRWRESYPVEGTKAEDAITVFTGVPTIYTRLIQGYQAMDPQSQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADEESESNVNKVGELCIKSPSLFKEYWKLPEVTKESFIDDGFFKTGDAVTTDQDGYYIILGRTNADIMKVGGYKLSALEIESVILENPAVSECCVLGLPDKAYGEVVCAIIVPEAESKRKREEESKPALTLEELSSWAKDRLAPYKIPTRLFLWDSLPRNAMGKVNKKELKKLLAEEQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral289g00027 543 Pfam AMP-binding enzyme 18 434 IPR000873 -
Pral289g00027 543 Pfam AMP-binding enzyme C-terminal domain 444 529 IPR025110 -
Pral289g00027 543 Gene3D - 6 427 IPR042099 -
Pral289g00027 543 MobiDBLite consensus disorder prediction 137 160 - -
Pral289g00027 543 Gene3D - 431 543 IPR045851 -
Pral289g00027 543 PANTHER ACYL-COA SYNTHETASE 23 537 - -
Pral289g00027 543 SUPERFAMILY Acetyl-CoA synthetase-like 13 541 - -
Pral289g00027 543 CDD MCS 17 537 - -
Pral289g00027 543 PRINTS AMP-binding signature 178 186 IPR020459 -
Pral289g00027 543 PRINTS AMP-binding signature 166 177 IPR020459 -
Pral289g00027 543 MobiDBLite consensus disorder prediction 132 160 - -
Pral289g00027 543 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Pral289g00027 543 FunFam Acyl-CoA synthetase family member 3 9 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral289g00027 Pral-Chr289 195723 203002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral289g00027 166 539 Monolignol Biosynthesis Gene Families AT4G19010 28.165 1.48e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral289g00027 K18660 - gmx:100813324 867.07