Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral289g00006 ATGTATTCTTGGGAACTGGCGCCCCTTACTCTCGTTCTCGCACTCGCTGCTTCGGATCACCTCATTCTCCTTCACAGTCAAGAAGTACCTCCGTACCAGACCGAGCCGCCGCCGACTCCGTCCAGTTCTTCTAAGTACGGAGCAATTGGAGCAAGTGTCTTTCTTTCGGTGATCGTGGTGGTGCTTTGTGCGATTTATTTTAAATGTAGAAAGAGAAGGACCAGATCACTCAGAGAAGAGGGAGGTTGCAAGTTCTACCTTGATAAAGGTGAGTACCTCGTGGAGGGTAAAGGTTGGACTGATAGCGTGGAAATGGGTGGCTATGAAATTGGGGCCTGGCGCTTGCGGAGTTACTCCCACCAAATCGTCAATGATAGGAATCTTTTGCCGGTCAGCAAGCCACCCTCAAGAAGCCGAGGACAACCAGAATCAATCCAAAATGCCAATAATGGAAATCAATTGCCTGGCAAAAATCAACACTCAAGAGGCCAAGACACGCGATCAGCCCGCACCGTGCCTCCTCAAGCACCACTCAAATCAATCCAAAATGCCAATGATGGAAATCAATTGTCTCACAAAAATGAAAACTCAAGAGCCCGAGACAAGCAATTAGCCCACACAGTGCCTCCTCAACCACCACTAGCCCCTCCATGGATGGCTGTCATTGTGCCTTTGAGAAGCTATGTTAAGACGTTAGCTTGCATTATGTCTTCTCAAGTGCAAGCAGAATCAATCCAAAATACCAATGATAGAAATCAATTGGCTGGCAAAACTGAACACTCAAGAGGTCGAGACAAGCGATCAACCCACACCATTCCTCCTCAAGCACCGCTAGAATCAATCCAAAATGCCAATGATGGAAATCAATTGCCTGGTAAAAATGAACACTCAAGAGGCCAAGACAAGCGATCAACCCGCACCGTGCCTCCTCAAGAACCACTAGGATCAATCCAAAATGCAAATGATGGAAATCAGTTGCCTCGTGAAAATGAAAACTCAAGAGGCCAAGACAAGCGATCAACTCGCACAGTGCTTCCTAAACCACCAGTAGAATCAATCCAAAATGCCAATGATGGAAATCAATTGCTTGGTAAAAATGAACACTGTAGAGGCCGAGACAAGCGATCAACCCGCACCATGCCTCCACAAGCACCACTAGAATCAATCCAAAATGCCAATGATGGAAATCAATTGCCTGGTAAAAATGAACACTCAAGAGGCCAAGACAAGCGATCAGCCCGCACCAAGCCTCCTCACGAACCACTAGAATCAATCCAAAATGCCAATGATGGAAATCAATTGCCAGGCGAAAATGAACACTCAAGTGGTCGAGATAGGCGATCAGCCCGTACCGTGCCTCTACAAGCTCCACTAGAATCAATCCGAAATGCCAATGATGGAAATCAATTGCATGGTACAAATGAACACTCAAGAGCCCTAGACAAACGATCAGCCCGCACCAAGCCTCCTTATGAACCACGAGAATCAATTCGAAATGCCAATGATGGAAATCAATTGCCTAGTACAAGTGAACACTCAAGAGACCTAGACAAGCGATCAGCCCGCACCAAGCCTCCTCACAAACCACTAGAATCAATCAAAAATGCTAATGATGGAAATCAATTGTCTAGCAAAAATGAACACTCAAGAGGCCGAGACAAACCATCAGCCTGCACCGTGCCTCCGCAAGCTCCACTAGAATCAATCCAAAATGCCAATGATGGAAATCAATTGCCTTGCGAAAATGAAAACTCAAGAAGCCGAGACAAGCGATCGGTCCGCACAGTACCACCTCAACCACCACTAGAATCAATCCGAAATGCCAATGATGGAAATCAATTGCCTGGTAAAAATGAACACTCAAGAGGTCTAGACAAGCAATCAGCTCGCATCGTGCCTCCTCAAGAACCACTAGAATCAATCCGAAATGCCAATGATGGAAATCAATTGCCTCATGAAAATGAACACTCGAGAGGCCTAGGCAAGCGATCTGCCCGCACCGTGCCTCCACAAGCTCCACTAGAATCAATCGAAAATGCCAATGACATAAATCAATTGCCTAGGAAAAATGAACACTTAAGAGGCCGAGGCAAGCGATCATCCCGCGCCGTGCCTTCTCAAGAACCACCAGCTTTACCATCTTTCTCCAAAGTCTTGGAACTCAAACACATACCAAGAATATTTACCTATGATGAATTACACTCAGCAACGAAAGGATTTGGTGATTCAAATTGTCTTGGCAAAGGTGGGTTTGGCACCGTCTATAAAGGAGTGCTCCCTTCTAATAGTAAGACTGTTGCGGTTAAGAAGCTAGAAGCTTGTGCCAGAGAAGGAATACAACAATTCCTCACTGAAGTAAATGTCATTAGCCAAGCCCATCACAAGCATATTGTTTCCCTGGTTGGATACTACTGTGGTCAAGATGAAGCCCCTGTGCCGGCCATGATGCTTGTTTATGATTTCATCCCAAATAATTCCCTAGGCTACCAGTTGCATGGAACAAGTACAAAAACTATAAACTGGGAAACAAGAATGAAGATTGCTATTGGCTCTGCAAAAGGATTGATATATCTTCATGAAGACTGTGAACCCAAGATCATACACTGTGACATCAAATCAGCTAACATTCTTCTAACTGATGATTTTCAGCCAAAGATAGCAGATTTTGGACTTGCAAAACTTTTGCCAGACACTGCTACCCACCTCTCTGTGCAACAATTCATGGGAACCTTTGGATATTTAGCTCCAGAGTGTTTAGTTGGTGGGAAAATCAGTGAGAAGTCGGATGTCTTCGCCTTTGGTGTTGTGCTTTTGGAGTTGATTACAGGACAAAAAGCTTGTGGGTCTTTCTCAGAGGGCATGGTTAAGTGGGCAAGACCTAAACTCTTCGCAGCTTTAAAATCGGAAGATCCGAACTTTGAGGCTCTTGCTGATCGAAGCTTGCAGAATAATTACAACTCCGAAGAGATGTTCCGAATGGCTTCTTGTGCTGCAAATTGCGTGCGAGATTCAGCCAATCTTCGTCCTACAATGAGAGAGGTGCACAATGCCATTACACTGTATCCCTAA 3069 0.4526 MYSWELAPLTLVLALAASDHLILLHSQEVPPYQTEPPPTPSSSSKYGAIGASVFLSVIVVVLCAIYFKCRKRRTRSLREEGGCKFYLDKGEYLVEGKGWTDSVEMGGYEIGAWRLRSYSHQIVNDRNLLPVSKPPSRSRGQPESIQNANNGNQLPGKNQHSRGQDTRSARTVPPQAPLKSIQNANDGNQLSHKNENSRARDKQLAHTVPPQPPLAPPWMAVIVPLRSYVKTLACIMSSQVQAESIQNTNDRNQLAGKTEHSRGRDKRSTHTIPPQAPLESIQNANDGNQLPGKNEHSRGQDKRSTRTVPPQEPLGSIQNANDGNQLPRENENSRGQDKRSTRTVLPKPPVESIQNANDGNQLLGKNEHCRGRDKRSTRTMPPQAPLESIQNANDGNQLPGKNEHSRGQDKRSARTKPPHEPLESIQNANDGNQLPGENEHSSGRDRRSARTVPLQAPLESIRNANDGNQLHGTNEHSRALDKRSARTKPPYEPRESIRNANDGNQLPSTSEHSRDLDKRSARTKPPHKPLESIKNANDGNQLSSKNEHSRGRDKPSACTVPPQAPLESIQNANDGNQLPCENENSRSRDKRSVRTVPPQPPLESIRNANDGNQLPGKNEHSRGLDKQSARIVPPQEPLESIRNANDGNQLPHENEHSRGLGKRSARTVPPQAPLESIENANDINQLPRKNEHLRGRGKRSSRAVPSQEPPALPSFSKVLELKHIPRIFTYDELHSATKGFGDSNCLGKGGFGTVYKGVLPSNSKTVAVKKLEACAREGIQQFLTEVNVISQAHHKHIVSLVGYYCGQDEAPVPAMMLVYDFIPNNSLGYQLHGTSTKTINWETRMKIAIGSAKGLIYLHEDCEPKIIHCDIKSANILLTDDFQPKIADFGLAKLLPDTATHLSVQQFMGTFGYLAPECLVGGKISEKSDVFAFGVVLLELITGQKACGSFSEGMVKWARPKLFAALKSEDPNFEALADRSLQNNYNSEEMFRMASCAANCVRDSANLRPTMREVHNAITLYP 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral289g00006 1022 SMART serkin_6 740 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral289g00006 1022 MobiDBLite consensus disorder prediction 403 418 - -
Pral289g00006 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 866 878 IPR008271 GO:0004672|GO:0006468
Pral289g00006 1022 ProSitePatterns Protein kinases ATP-binding region signature. 746 770 IPR017441 GO:0005524
Pral289g00006 1022 MobiDBLite consensus disorder prediction 475 495 - -
Pral289g00006 1022 MobiDBLite consensus disorder prediction 347 362 - -
Pral289g00006 1022 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 709 1018 IPR047117 -
Pral289g00006 1022 MobiDBLite consensus disorder prediction 137 192 - -
Pral289g00006 1022 SUPERFAMILY Protein kinase-like (PK-like) 717 1017 IPR011009 -
Pral289g00006 1022 CDD STKc_IRAK 746 1014 - -
Pral289g00006 1022 MobiDBLite consensus disorder prediction 242 712 - -
Pral289g00006 1022 MobiDBLite consensus disorder prediction 126 216 - -
Pral289g00006 1022 FunFam PTI1-like tyrosine-protein kinase 3 822 1021 - -
Pral289g00006 1022 MobiDBLite consensus disorder prediction 306 330 - -
Pral289g00006 1022 MobiDBLite consensus disorder prediction 255 269 - -
Pral289g00006 1022 MobiDBLite consensus disorder prediction 563 582 - -
Pral289g00006 1022 ProSiteProfiles Protein kinase domain profile. 740 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral289g00006 1022 MobiDBLite consensus disorder prediction 381 402 - -
Pral289g00006 1022 Gene3D Phosphorylase Kinase; domain 1 725 821 - -
Pral289g00006 1022 MobiDBLite consensus disorder prediction 273 294 - -
Pral289g00006 1022 MobiDBLite consensus disorder prediction 511 531 - -
Pral289g00006 1022 Gene3D Transferase(Phosphotransferase) domain 1 822 1021 - -
Pral289g00006 1022 Pfam Protein tyrosine and serine/threonine kinase 745 1017 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral289g00006 Pral-Chr289 51935 69988 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral289g00006 728 1018 Trihelix Transcription Factor Family AT1G70460 51.864 4.81e-90 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral289g00006 PK_Tyr_Ser-Thr 8.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral289g00006 - - pcin:129289307 336.65