Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral289g00005 ATGAGCATTGAAACTGGTAAAGTTGAAGTAGTTTCAAGTCCAGTGTCACGAATTGCTTCTGGCCTTGCATTAGGACCTCAAACATTTACATATCAGGAATTAACATTGGCAACAGATGGATTATCAAGGTCAAATTTTCTGGGCGAAGGCGGTTTTGGCATTGTCCATAAAGGAGTCCACCCCAGTATGAATAATAAAAGTGTTGCCATTAAGCAGCTTAAATCCACAATGGAAGAGGCAAAGAGGGATTTCCAGTCTGAGGCCGTGATCATTAGTCGAATCCATCACAAACATCTTGTTTCACTTGCTGGATACTGCGTTGATGAAGTTCACAAAAAGGTGATGCTTGTTTATGAGTATGTCCCAAATAGAACCCTAGCGCACCACCTGCATGGAGAAGGCACAACACATGTAGACTGGGAAACAAGGATGAAAATTGCTGTTGGCTCTGCGCAAGGATTGAAATATCTGCATGAAGACGGAAGACTTTCCTTGTTCAAACACCCTCTGTGTTTGTACAAGGAGAAAATTAATAATATGGTTGCAGATTTTGGACTCGCCAGATTGCTATTAGAGGCCCATATCATGACTCAAGTGATGGGAAATCAGGGGTACATTGCTCCAGAATTTGCTGTGAGCGGCAATTACTCTGAGAAGTCAGATATATTCTCCTTTGGCATTGTGCTTTTAGAGCTGATTACAGGACGACAACCTGTTAATGATCGTGAGAAGTACCCGAAATGTTTGTATGAGTGGGCGACAACGTTGTTGTCGGAAGCTTTGAGAAACAGAAACTTTGAGGAGCTTGCTGATGCCAGGTTGCGAGGAAAGTATGACCCGGGAGAGATGTTTCGAATGGTTTCTTGTGCTGCTAATTGCGTCCGCCATTCAGCCGAGCGTCGTCGTCGAATGAGCGAGGTAATTCGGGCTCTAGAAGGCAATATTTCTTTGGATGATCTGAATGAGGGGAGGACACCTGGGCACAGCAGAGCATTTAGATCCCGCTCAAGTTCTATCCTTCAGTTTCAATACTTTGTATCAAACGATACCTATGTGCCTTTGAAAGTTCGGGTTATGTACAATGGTGAATACAGTGGGCCCAGTAGCGATTATGGTCAACAACATTCTGCCGCAAGCAGTTCAGGCCTGCAAAATACACGAGAAATAACGGGGAATGTGGGACGGGAGATTGGCTGA 1197 0.4428 MSIETGKVEVVSSPVSRIASGLALGPQTFTYQELTLATDGLSRSNFLGEGGFGIVHKGVHPSMNNKSVAIKQLKSTMEEAKRDFQSEAVIISRIHHKHLVSLAGYCVDEVHKKVMLVYEYVPNRTLAHHLHGEGTTHVDWETRMKIAVGSAQGLKYLHEDGRLSLFKHPLCLYKEKINNMVADFGLARLLLEAHIMTQVMGNQGYIAPEFAVSGNYSEKSDIFSFGIVLLELITGRQPVNDREKYPKCLYEWATTLLSEALRNRNFEELADARLRGKYDPGEMFRMVSCAANCVRHSAERRRRMSEVIRALEGNISLDDLNEGRTPGHSRAFRSRSSSILQFQYFVSNDTYVPLKVRVMYNGEYSGPSSDYGQQHSAASSSGLQNTREITGNVGREIG 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral289g00005 398 Pfam Protein tyrosine and serine/threonine kinase 44 310 IPR001245 GO:0004672|GO:0006468
Pral289g00005 398 MobiDBLite consensus disorder prediction 366 398 - -
Pral289g00005 398 Gene3D Transferase(Phosphotransferase) domain 1 121 323 - -
Pral289g00005 398 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Pral289g00005 398 Coils Coil 63 83 - -
Pral289g00005 398 MobiDBLite consensus disorder prediction 366 391 - -
Pral289g00005 398 ProSiteProfiles Protein kinase domain profile. 41 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral289g00005 398 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 26 328 IPR047117 -
Pral289g00005 398 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 15 120 - -
Pral289g00005 398 Gene3D Phosphorylase Kinase; domain 1 18 120 - -
Pral289g00005 398 SUPERFAMILY Protein kinase-like (PK-like) 24 311 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral289g00005 Pral-Chr289 34180 42246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral289g00005 29 343 Trihelix Transcription Factor Family AT5G38560 48.466 7.67e-100 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral289g00005 PK_Tyr_Ser-Thr 1.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral289g00005 - - ccaj:109808169 382.489