Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral289g00003 ATGATAAATCCGTTAGTTACCGTGTGCCTTGCAGAATCCAACCGAATCGCCAATTTTGGAGATCCTTTGCCGGTCAACAACCCACGCTCAACAAACAATGTACGAGGTCGGGCACCATCTCGTCCCAAAGTCGTGGATATCCCTCGCGCAGCACCAAGAATATTTACATATGAAGAATTAGAATTGGCGACAGATGGATTCTCAAAGTCAAAAAAAGTCGGGGAAGGTGGTTTTGGCACTGTCTATCAAGGAGTCCTCAATAATGAATTTGTTGCAGTTAAGAAGCCGAGATCTGGAGCCAACCAGGGAAAACAGCAGCTCCAGACTGAAATCCAGGTCATTAGCCAAGCCCGTCACAGACATATTGTTTCCCTCGTCGGATACTACATTGATGAGGATGAAGAACGTGGGAAGGACATGTTGCTTGCTTATGAGTTCATCCCAAATGGTTCATTACACTCCCACCTGCATGGAAAAGGCACAAAAATTATAGACTGGGAAACAAGGATGAAGATTGCTATTGGATCTGCAAAAGGATTCGCATATCTTCATGAGGGCTGTAAACCCAAAATCATGCACGGTGACATCAAACCCCATAACATTCTTCTTCTTGATGATTTTCAGCCAAAGATAGCAGACTTTGGACTTGCACAGCTTCTATCTGACAGTGTTACCCACGTCTCTATGTCGCAAGCCCAGGGAACCGTGGGATATTTAGCTCCAGAGTACTTTGAAGGGAAACTCAGTGAGAAGTCAGATGTCTACGCCTTTGGTGTTGTACTTTTAGGGATGATTACAGGACGACAACCTTGTGACTTCAGAGGGGCCTTGGTTAAATGGGCAACTCCTCGACTCATCGCAGCCTTGGAATCGAGAAACTTTGAGGCTCTTGCTGATCCAAGGTTGCAGAATCATTACGACCCGGAAGAGATGTTTCGGATGGTTTCTTGTGCTGCCAATTGCGTTTGCGTTTCACCCGCGGCTCGTCCACGAATGAGCAAGGTGGTTCAAGCTTTGGAAGGAGCGATTGTCCTGGATAATCATCTCGCGGAGGAAGCCGCTTCAAGACTTCAACCGCAAGCATCCATGGAGGCTAAGAGAGAGATGGCGCTGGTGACAATCTGA 1125 0.4684 MINPLVTVCLAESNRIANFGDPLPVNNPRSTNNVRGRAPSRPKVVDIPRAAPRIFTYEELELATDGFSKSKKVGEGGFGTVYQGVLNNEFVAVKKPRSGANQGKQQLQTEIQVISQARHRHIVSLVGYYIDEDEERGKDMLLAYEFIPNGSLHSHLHGKGTKIIDWETRMKIAIGSAKGFAYLHEGCKPKIMHGDIKPHNILLLDDFQPKIADFGLAQLLSDSVTHVSMSQAQGTVGYLAPEYFEGKLSEKSDVYAFGVVLLGMITGRQPCDFRGALVKWATPRLIAALESRNFEALADPRLQNHYDPEEMFRMVSCAANCVCVSPAARPRMSKVVQALEGAIVLDNHLAEEAASRLQPQASMEAKREMALVTI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral289g00003 374 Gene3D Phosphorylase Kinase; domain 1 41 146 - -
Pral289g00003 374 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 42 146 - -
Pral289g00003 374 CDD STKc_IRAK 73 341 - -
Pral289g00003 374 SMART serkin_6 67 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral289g00003 374 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 147 353 - -
Pral289g00003 374 ProSiteProfiles Protein kinase domain profile. 67 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral289g00003 374 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 43 366 IPR047117 -
Pral289g00003 374 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524
Pral289g00003 374 Pfam Protein kinase domain 67 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral289g00003 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Pral289g00003 374 SUPERFAMILY Protein kinase-like (PK-like) 47 340 IPR011009 -
Pral289g00003 374 Gene3D Transferase(Phosphotransferase) domain 1 147 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral289g00003 Pral-Chr289 24447 28054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral289g00003 55 354 Trihelix Transcription Factor Family AT1G70460 51.603 3.58e-97 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral289g00003 Pkinase 9.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral289g00003 - - pcin:129289322 352.058