Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral289g00002 ATGGCTCAGCATGAATCCAGTGTCGGGAATCCTTTGTCGGTCAACAAGCCACGGTTGCAAAACCTTGCAACACAGCTAGATGCAGCCCGTGGGAGAGACATGATGCTTGTTTATGAGTTCATCCCAAATGGTTCGTTAGAGTCCCACCTGCATGGAAGGGACACAGAAACTATAGACTGGGAAACAAGGAAGAAGATTGCTATCGGCTCCGCAAGAGGATTGGAATATCTTCATGATAGCTGTAAACCCAGAATCATACACCTTGACATCAAACCAGCCAACATTCTTCTTCTTGAAGATTTTCAGCCAAAGGTTCTGCTATATATATCGTTGGAACTCAGATGTTTAGCTCCAGAATATACTCGAGGGAGAAAAGCCACTGAGAAGGCAGATGTGTTTGCCTTTGGTGTTGTGCTTTTGGAGTTGATCACAGGACGAAAACCCAGTGACTTCACAGATAACACGTCAGAACCTGAACTCTTAGCAGTCTTGAACTCGGAAGATCGAAACTTTGAGGCTCTTGCCGATCCAAGGTTGCAGAACCATTACAACCCGGAAGAGATGTTTCGAATGGTTTCTTGTGCTGCCAGTGGCATTCACCAGTCCTCCGCGCGTCGTCCTCAAATGAGCCAGGTGGCTATGGCTTTAGAAGGATGGCCTGGCCTAGATAATGACCCGACCCAGAACATCGCCCCTAGACGGTGTTTGGATTTGCTTTTTGAAGACGGAAGTGTACGAGGAAATACAAGGCAGAAAAAACAAGCAACCAATAAGAGAAAAACTGATCTCCCGTATCCGAGAGAAGAATCTGCGCCGTGGCCTCAGGGCCAAAAAATTGCAGGCCGTATCCCGCAGCTAACCCGCGCTTCGCAAGCATATCCGCTTTCCTATTGTCCTCTCTGTCGATCTGTTGAAAACTCACCTTCCAATCTCTTCGAAGCATGCTCTTGGCTTCGTCAATCAGAGAGGACTCCTCATGCAGCTCCGTTTGGGTCATCTGAATTAAGTTCAGAGCTTCTTGCGAGTCGCTCTTCAGGACGATCTGTCTGA 1050 0.4771 MAQHESSVGNPLSVNKPRLQNLATQLDAARGRDMMLVYEFIPNGSLESHLHGRDTETIDWETRKKIAIGSARGLEYLHDSCKPRIIHLDIKPANILLLEDFQPKVLLYISLELRCLAPEYTRGRKATEKADVFAFGVVLLELITGRKPSDFTDNTSEPELLAVLNSEDRNFEALADPRLQNHYNPEEMFRMVSCAASGIHQSSARRPQMSQVAMALEGWPGLDNDPTQNIAPRRCLDLLFEDGSVRGNTRQKKQATNKRKTDLPYPREESAPWPQGQKIAGRIPQLTRASQAYPLSYCPLCRSVENSPSNLFEACSWLRQSERTPHAAPFGSSELSSELLASRSSGRSV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral289g00002 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 85 97 IPR008271 GO:0004672|GO:0006468
Pral289g00002 349 MobiDBLite consensus disorder prediction 326 349 - -
Pral289g00002 349 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral289g00002 349 Pfam Protein kinase domain 31 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral289g00002 349 Gene3D Transferase(Phosphotransferase) domain 1 13 106 - -
Pral289g00002 349 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 30 105 IPR047117 -
Pral289g00002 349 Gene3D Transferase(Phosphotransferase) domain 1 109 226 - -
Pral289g00002 349 MobiDBLite consensus disorder prediction 246 277 - -
Pral289g00002 349 Pfam Protein tyrosine and serine/threonine kinase 112 214 IPR001245 GO:0004672|GO:0006468
Pral289g00002 349 SUPERFAMILY Protein kinase-like (PK-like) 31 217 IPR011009 -
Pral289g00002 349 SMART serkin_6 6 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral289g00002 Pral-Chr289 18505 23361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral289g00002 35 217 Trihelix Transcription Factor Family AT1G70460 43.415 1.06e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pral289g00002 PK_Tyr_Ser-Thr 3.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral289g00002 - - pcin:129289322 204.912