Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2899g00002 ATGAAAAAAACCTGGTCTTTCATCCATATCATCGGCGTTCTTGGCCTGTCTAGTCTACTCTTGTCTGAAATCTGTCTGGCTGGCATTCAGAGCATCGGCTCTATCACTCCAGGATTTCAAGGCACTCAAATGAATTGGATTGACAAAAACGGCATGTTTCTCGTGTCAAATAATGGAGAATTTATGTTTGGCTTCATCACTACCCCGAACGACAACTCATTATATCTTCTAGTAATCGCCCACGGTGACAACTCCAAAGTTGTTTGGACGGCAAACAGAGGCCTCCCTGTTAGTAATTCTGATAATTTTGTGTTCGACAAAACCGGTAATGTCTTTCTACAGAAAGGAAGCGATGTGGTTTGGTCTACAGATACGAAGGGCAAAGGGGTTTCTTCAATGGCATTACAGGACACAGGAAACTTGGTGTTGCTTGCTGACGATAATAGTACAATTTGGCAGAGTTTCGGCCATCCAACTGACACCTTATTGTCAATGCAGGAATTCAAAGAGGGCATGAAACTTATCAGTGAACCTGACCAATATAACTTAACCCACGTTCTGGAGATCAAATCTGGTGATTTTGTTCTCTCTGCTGGTTTTCAAAACCCACAGCCTTATTGGTCTATGCAGAACGAGGACCGCAGAATCATCGATAAAGATGGTAACGCGGTGGCTTCGGCCTCCATTAGCGCAAATTCGTGGAGGTTCTATGATAAAAATAAATCTTTGTTATGGCAGTTCATTTTGGCTGAAGATTCATCAGGCACAAATTCCACTTGGGCTGCTGTTCTGGGAAGTAATGGTTTCATCACTTTCTCTAATCTCGACAGTGGAAGTTCAAATAATCCCTCGCCAACAAAAATCCCAAAAGATTCTTGCAGCACACCTGAACCTTGTGGTCCTTATACCATATGCACGGATGATAACAAGTGTCGTTGCCCTTCGGCTCTGAGATCTCGCGCCAATTGCAAACCAGGGATTGTCTCTCCTTGCGATGGCTCAAATGGATCCGCGGAGCTTGCGGAAGGTGATGATGGGCTTGGTTACTTCGCTCTTGGATTCCTTTCACCATCCTCCAAAACTGATTTGGATGGCTGCAAATCTTCCTGCCTGGGAAATTGCTCATGCCTTGCTATGTTCTTCCACAACAATTCAGGGAACTGTTTCATGTTGGATAGTATAGGAAGCTTTGAGAGTTCTGACACAGATTCAGGTTTTGTTTCTTACATTAAGGTCTCGAGTAACGGAGGATCTGGCTCTTCAGGAGGTGGAAGCAGCAAGAAGCACACTGTGGTGGTTGTAGTTATTGTCATAACAACTTTGCTTGTCATTTTCGTTTTGTTCTATGTGGGACTTAGATACTACAGAAGAAAGCAAAAATCGCCTGAGTCTCCAAGGGGGAGTTCAGAAGAGGACAATTTCTTGGAGAATCTTACTGGTATGCCTGTCCGTTTCAGCTATAAAGAACTGCAAACAGCTACTAAGAACTTCTCTGAGAAGCTAGGGCATGGAGGTTTTGGCTCAGTTTATAAAGGAGTTCAACCAGATGGGACTCTATTAGCTGTGAAGAAGCTGGAAAGCATAGGCCAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGCAGCATTCATCATCTTCATTTAGTTCGGCTTAAAGGATTCTGTGCTGAAGGAACTCATCGCCTTCTTGCTTATGAGTTTATGGCAAATGGCTCATTGGATAAATGGATATTCAAGAAAAACGGAGAATTATTGTTGGATTGGGATACGAGGTTTAATATAGCTTTGGGCACAGCAAAAGGGCTTGCGTACCTGCACGAGGATTGCGATTCAAAGATTGTTCACTGTGACATCAAACCAGAAAATGTTCTTCTTGATGAGCATTTCCTTGCGAAAGTTTCAGACTTTGGGTTGGCTAAACTCATGACTCGCGAACAAAGCCATGTTTTCACAACACTAAGGGGAACCAGGGGATATCTTGCACCAGAATGGATCACAAACTATGCCATATCGGAGAAAAGCGATGTGTATAGCTATGGGATGGTGTTGCTAGAGATAATTGGTGGTAGGAAAAATTATGACCCTAACGAGTCTTCAGAGAAATCCCACTTCCCAACCTTTGCTTACAAGATGATGGAAGAAGGGAAGTTAAAAGATCTTCTTGATTCAAAGTTGAAAATAGATGAGAATGATGAAAGGTTTCATATTGCCATCAAAGTTGCATTGTGGTGCATACAGGAAGATATGTCTCTAAGGCCTTCCATGACCAAAGTGGCTCAGATGCTTGAGGGTCTCTGTACTGTTCCTAAGCCACCATCGTCTTCTCCAATGGGTTCTCGCCTGTACTCGTCTTTCTTCAAATCTATGAGTGAAGGTGGCACCTCCTCAGGACCATCAGATTGCAATAGTGATGCATATCTTTCAGCAGTTAGGCTTTCGGGACCAAGATAA 2457 0.433 MKKTWSFIHIIGVLGLSSLLLSEICLAGIQSIGSITPGFQGTQMNWIDKNGMFLVSNNGEFMFGFITTPNDNSLYLLVIAHGDNSKVVWTANRGLPVSNSDNFVFDKTGNVFLQKGSDVVWSTDTKGKGVSSMALQDTGNLVLLADDNSTIWQSFGHPTDTLLSMQEFKEGMKLISEPDQYNLTHVLEIKSGDFVLSAGFQNPQPYWSMQNEDRRIIDKDGNAVASASISANSWRFYDKNKSLLWQFILAEDSSGTNSTWAAVLGSNGFITFSNLDSGSSNNPSPTKIPKDSCSTPEPCGPYTICTDDNKCRCPSALRSRANCKPGIVSPCDGSNGSAELAEGDDGLGYFALGFLSPSSKTDLDGCKSSCLGNCSCLAMFFHNNSGNCFMLDSIGSFESSDTDSGFVSYIKVSSNGGSGSSGGGSSKKHTVVVVVIVITTLLVIFVLFYVGLRYYRRKQKSPESPRGSSEEDNFLENLTGMPVRFSYKELQTATKNFSEKLGHGGFGSVYKGVQPDGTLLAVKKLESIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCAEGTHRLLAYEFMANGSLDKWIFKKNGELLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDEHFLAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPNESSEKSHFPTFAYKMMEEGKLKDLLDSKLKIDENDERFHIAIKVALWCIQEDMSLRPSMTKVAQMLEGLCTVPKPPSSSPMGSRLYSSFFKSMSEGGTSSGPSDCNSDAYLSAVRLSGPR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2899g00002 818 FunFam serine/threonine-protein kinase PBS1-like 464 569 - -
Pral2899g00002 818 ProSitePatterns Protein kinases ATP-binding region signature. 501 524 IPR017441 GO:0005524
Pral2899g00002 818 SMART serkin_6 495 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2899g00002 818 CDD STKc_IRAK 501 767 - -
Pral2899g00002 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Pral2899g00002 818 PIRSF SRK 9 814 IPR024171 GO:0004674
Pral2899g00002 818 CDD PAN_AP_plant 358 412 - -
Pral2899g00002 818 FunFam Serine/threonine-protein kinase 41 156 - -
Pral2899g00002 818 SMART blect_4 45 158 IPR001480 -
Pral2899g00002 818 Pfam Protein kinase domain 498 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2899g00002 818 SUPERFAMILY Protein kinase-like (PK-like) 476 765 IPR011009 -
Pral2899g00002 818 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 45 775 - -
Pral2899g00002 818 Gene3D Phosphorylase Kinase; domain 1 460 569 - -
Pral2899g00002 818 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Pral2899g00002 818 CDD B_lectin 47 158 IPR001480 -
Pral2899g00002 818 Pfam D-mannose binding lectin 87 168 IPR001480 -
Pral2899g00002 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 176 IPR036426 -
Pral2899g00002 818 Gene3D Transferase(Phosphotransferase) domain 1 570 772 - -
Pral2899g00002 818 Gene3D - 45 157 IPR036426 -
Pral2899g00002 818 ProSiteProfiles Protein kinase domain profile. 495 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2899g00002 818 FunFam S-receptor-like kinase 5 570 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2899g00002 Pral-Chr2899 4406 7790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2899g00002 442 776 Receptor kinase-like Gene Family AT5G20050 44.413 5.77e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral2899g00002 Pkinase 3.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2899g00002 - - gmx:100791158 1167.53