Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2898g00006 ATGGCTGTTTCATCAATCCTACACGTTCTTCTCCTCTTGTCTCTGTCTTTTCAATGTTGTTCATCTTCATCACCATCACTTAACAGTGGTTTCTCCCTCTCAGTTGAGAAACCAGAAGATGTTATTCTCTCACCGAACGGCGTCTTCTCTGCCGGCTTCTACGCCGTCGGTGAAAACGCCTATGTATTCTCCGTTTGGTTCACTCGAAAACCCACCGTCGTTTGGACGGCTAACCGTGACCAACCTGTCAACGGAAAACGGTCATCACTTCGCCTCCATAAAACCGGAAACCTTGTCCTCTCTGATGCCGGACAGTTCAACGTGTGGTCCACTGACACTACCTCATCTTTGCCTTGGTTGACGCAACTGAATCTTACCGATAAAGGGAATCTAGTACTTTACGAGCTCCATCCTCAACAAAGCGAAATTCTATGGCAGAGCTTCGATTTCCCGACCGACACTCTACTTCCTGGACAACAACTCACAAGATACACAAAGCTTGTCTCTGATAGAAGCCTCACCAACCATTCCTCTGGCTTCTACCAGCTTTCATTCAATGATGACAACATCCTCAGCCTTTTGTACGATGGCCTTGATGTCTCCAGCAAATACTGGCCAGTCCAATGGCTAGTAAGTTGGGATGCAGGAAGGACCACATACAATAGTAGCAGAATCGCAGTGTTAGATTCCATTGGAACTTTCAATTCAACAGATAATTATGGATTTACGACTTCTGATTATGGGGTTGTAATGCAAAGAATATTGAAACTAGATTCTGATGGAAACATTCGAGTGTACAGTCGACGGAAGAATGATCCCTGGTATGTGTCGTGGCAAGCCATATCTAATCCCTGTATTGTTCATGGACTTTGTGGTGCTAACAGCACGTGTGTGTATGATCCTATAGAAGGAAGGAAGTGTTCGTGTCTTCCTGGATATAGAGTGAAGAACCATAGCGATTGGTCTTACGGGTGTGAACCCACATTTAAACTCTCATGCGATAAGAATGAGACTGCTTTCTTCAAATTGCCAGGTGTTGAGCTATATGGGTATGACTTTATTTACAAGAAAAACATCAGTTATAGTGATTGTGAGAATGAATGCTTACAAGATTGTGAGTGCAGGGCATTTCAGTACTCACTTAACAATGACGGCTTATTTCAGTGCTATACGAAAAGAGTTCTTCTCAATGGTCGTCGATCACCAGACTTTAGAGGAACAACCTACCTGAGACTTCCTAAAGCCAAAAGAAACAATGTTTCGTTCTTTGCAGATGAAGAATTTGCTCAAGATGATGGTCATGTTTGTTCAGTGAAGCTGGATAGGTCCTATGCCGAGAGTCATGTCAGCAGTTTTTTGAAGTTCTTTCTTTGGTTTTCTGTTGCAATTGGGGTGTTTGAAGTCCTCTTCATTTCTATAACTTGGTTTTCTTTGATAAGAACCAAGCAAAAATCTGATGGAAATCAACAAGGGTACAATTTTGTTTCACCTTTTGGGTTCAGAAGATACACTTACTCTGAGCTAAAACAAGCAACAAAAGGGTTCACGGAAGAAATTGGAAGAGGAGCTGGTGGAATTGTGTACAAAGGAGTATTGCCAGATCAGCGAATTGCTGCAATAAAGAAGCTTCATAATGACAACATTGGAGCCAAACGAGATGAAGCAGAATTCCTAGCTGAAGTGAGCATTATTGGTAAGCTAAACCACATGAACTTGATTGAAATGTGGGGGTATTGTGCTGAGGGAAAGTACAGGCTGTTGGTTTACGAATACTTGGAGAAAGGTTCTTTAGCAGAAAATCTCAAATCAAACACCTTGGATTGGACCAGAAGATACAACATTGCTCTCGGAACAGCAAGGGTTCTAGCATACTTACACGAAGAATGCTTGGAGTGGATTCTACATTGTGATATAAAGCCTCAGAATATTCTTTTGGATTCAAATTACCAACCCAAGGTAGCAGATTTTGGTTTATCTAAGCTTCTAAATAGAAGTGACCAAAACACTCAAAACTTCTCAATGGTAAGAGGAACGAGAGGATACATGGCACCTGAATGGGTTTTTAATTTGCCAATAACATCAAAGGTGGATGTGTATAGCTTTGGGATTGTTGTGCTGGAGATGATAACAGGAAGGAGTCCGACGATGATGGGAGGTCAGAGTGATGAAGGAGAAGAAGCACATAATGAGAGGCTTGTGACGTGGGTGAGAGAGAAGAGGAAGACAACGACGTCGGAGGAGGAAGGGTCGCCGTCATCGTCTTGTTGGGTGGAGCAAATAATTGACGCAGCCATTGGATCGGAGTTTGAGGTTGAGAAAAAGAAGATGGAAACTTTGGCAAGTGGGGCTTTGAAGTGCGTGGAAGAAGACAAAGATGCGAGGCCCAGCATGAGCCAAGTTGTTGAGATGCTTCAAAGCCATGAAGATGCTTAA 2433 0.4283 MAVSSILHVLLLLSLSFQCCSSSSPSLNSGFSLSVEKPEDVILSPNGVFSAGFYAVGENAYVFSVWFTRKPTVVWTANRDQPVNGKRSSLRLHKTGNLVLSDAGQFNVWSTDTTSSLPWLTQLNLTDKGNLVLYELHPQQSEILWQSFDFPTDTLLPGQQLTRYTKLVSDRSLTNHSSGFYQLSFNDDNILSLLYDGLDVSSKYWPVQWLVSWDAGRTTYNSSRIAVLDSIGTFNSTDNYGFTTSDYGVVMQRILKLDSDGNIRVYSRRKNDPWYVSWQAISNPCIVHGLCGANSTCVYDPIEGRKCSCLPGYRVKNHSDWSYGCEPTFKLSCDKNETAFFKLPGVELYGYDFIYKKNISYSDCENECLQDCECRAFQYSLNNDGLFQCYTKRVLLNGRRSPDFRGTTYLRLPKAKRNNVSFFADEEFAQDDGHVCSVKLDRSYAESHVSSFLKFFLWFSVAIGVFEVLFISITWFSLIRTKQKSDGNQQGYNFVSPFGFRRYTYSELKQATKGFTEEIGRGAGGIVYKGVLPDQRIAAIKKLHNDNIGAKRDEAEFLAEVSIIGKLNHMNLIEMWGYCAEGKYRLLVYEYLEKGSLAENLKSNTLDWTRRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLLNRSDQNTQNFSMVRGTRGYMAPEWVFNLPITSKVDVYSFGIVVLEMITGRSPTMMGGQSDEGEEAHNERLVTWVREKRKTTTSEEEGSPSSSCWVEQIIDAAIGSEFEVEKKKMETLASGALKCVEEDKDARPSMSQVVEMLQSHEDA 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2898g00006 810 SMART serkin_6 513 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2898g00006 810 CDD PAN_AP_plant 329 413 - -
Pral2898g00006 810 Pfam PAN-like domain 333 390 IPR003609 -
Pral2898g00006 810 Pfam Protein kinase domain 516 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2898g00006 810 CDD EGF 284 318 - -
Pral2898g00006 810 SUPERFAMILY Protein kinase-like (PK-like) 491 804 IPR011009 -
Pral2898g00006 810 Gene3D - 22 150 IPR036426 -
Pral2898g00006 810 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Pral2898g00006 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Pral2898g00006 810 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Pral2898g00006 810 CDD B_lectin 42 151 IPR001480 -
Pral2898g00006 810 SMART blect_4 33 151 IPR001480 -
Pral2898g00006 810 PANTHER OS07G0415500 PROTEIN 4 807 - -
Pral2898g00006 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 169 IPR036426 -
Pral2898g00006 810 CDD STKc_IRAK 519 805 - -
Pral2898g00006 810 FunFam Putative receptor-like protein kinase 592 810 - -
Pral2898g00006 810 FunFam S-receptor-like serine/threonine-protein kinase 481 591 - -
Pral2898g00006 810 ProSiteProfiles EGF-like domain profile. 281 319 IPR000742 -
Pral2898g00006 810 Pfam S-locus glycoprotein domain 246 316 IPR000858 GO:0048544
Pral2898g00006 810 SMART ntp_6 335 412 IPR003609 -
Pral2898g00006 810 Gene3D Phosphorylase Kinase; domain 1 477 591 - -
Pral2898g00006 810 Gene3D - 151 276 IPR036426 -
Pral2898g00006 810 SUPERFAMILY Hairpin loop containing domain-like 334 390 - -
Pral2898g00006 810 Pfam D-mannose binding lectin 72 173 IPR001480 -
Pral2898g00006 810 Gene3D Transferase(Phosphotransferase) domain 1 592 810 - -
Pral2898g00006 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Pral2898g00006 810 ProSiteProfiles PAN/Apple domain profile. 333 413 IPR003609 -
Pral2898g00006 810 ProSiteProfiles Protein kinase domain profile. 513 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2898g00006 Pral-Chr2898 50427 52913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2898g00006 503 810 Trihelix Transcription Factor Family AT5G38560 39.617 1.44e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral2898g00006 Pkinase 6.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2898g00006 - - gmx:100784287 988.023