Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2898g00004 ATGGCAGTTTCATTAATGCTTCACGTTCCTCTCCTCTTATCTCTTTTTTTCCAATCTTCATCATCACATAATAGTCGCTTCTCTCTTTCAGTTGAAAAACCAGAAGATGTCATTCTGTCACAAAACGGCGTCTTCTCTGCCGGCTTCTACCTCGTTGGTGAAAACGCCTATGTTTTCTCCATTTGGTTCGCCCAAACCCATGCCGTCGTTTGGACAGCAAACCGTGACCGACCCATCAACGGTAAGCGCTCCTCACTCTCCATCCACCGCACCGGAAACCTTGTCCTCTCTGATGCTGGCCAGTACAAGGTGTGGTCGACCGACACCACCTCGTCTTTGCCGACCCAATTGATCCTCAACAACAACGGAAATCTAGTACTTTATGAGCACCAATTACGAGGAAGCAAGATTCTATGGCAGAGCTTTGATTTCCCAACAGACACTCTACTTTCTGGGCAACAGCTCACAAGATATACAAAGCTCGTCTCTGCTAGAAGCGAAACCAACTATTCCTCTGGATTCTACAAGCTTGTCTTCGATGACGAAAATGTTCTTAGCCTTCTATATGATGGTCCCGATGTCTCCAGCAAATATTGGCCATCACCGTGGCTTAAGAGCTGGGAGGTCGACAGAAACATCTACAATAGCGGTAGAATTGCAGTGTTAGATTCACTTGGACGTTTCAGTTCAACAGACATGTATAACTTCACAACTTCTGATTATGGTGTTTTGATACAAAGAAGATTGAAATTAGATCCTGATGGAAACATTCGAGTGTACAGCCTACATAATAATCAATGGGAAGTGACATGGCAAGCCATATCCGATGCTTGTATTGTGCATGGACTTTGTGGTGCTAACAGCACATGCAAGTACGATCCCAATGAAGGAAGGAAGTGCTCATGTCTTCCGGGATATAGAGTGAAGAATCATAGTGATTGGTCTTATGGTTGTGAACCCATCTTTCAACTGCCACGAGGTAGAAATGAGTCCACCTTCATCAAATTACCCAATGTTGAGCTGTATGGGAATGACTTATTTCAGAAAGAGAACATCACTTACGGTGAATGTGAGCGTAAATGCTTAAAAGACTATGAGTGCAAGTCATTTCAGTACTCACTTGCCAGTGAGGGCGACCCGTTTCATTGCTTTACAAAAGGAGTTATGCTCAATGGTCGTCACTCACCAAGTTTCAGAGGAGCAACCTACTTAAGAGTCCCAAAAAACCTAAGCAACAATGGTTTGTTCCATACTGTAGAAGAAGAATCGGCTCAGGAAAATGGTCGTGTTTGCTTAGTGAAGCTTGAAAGAGTTTATAGCAAGAGACACGTCAGCAGTTTTGTGAAGTTCTTCCTTTGGTTTTCGGTAGCAATTGGGGTAGTTGAAGTGCTCTTGATTTTTATAATTTGGTGTTCTTTGATTAGAACAAAACACAGGTCTAGCCGAAATCAACAAGGCTACAATTTTCTCTCTCCTTTTGGGTTCAAAAGATTTACTTACTCTGAGCTCAAACAAGCAACAAAAGGGTTCACAGAAGAAATTGGAAGAGGCTCAGGCGGAATAGTGTACAAAGGAGCACTGGTTGATCAAAGAATTGCAGCAATTAAGAAGCTGAACAATAACATCGTTGGAGCCAAACAAGAAGAAGGAGAATTCCTCGCTGAAGTGAGAATAATCGGTAGGCTTAACCACATGAACTTGATTGAGATGTGGGGGTATTGTGCCGAGGGAAAGCACAGGCTGTTGGTGTATGAATACTTGGAGAAAGGTTCTTTAGCAGAAAATCTCAAATCAAACACTCTGGATTGGACCAAAAGATACAACATTGCTCTTGGAACAGCAAGGTGTCTCGCTTACTTACATGAAGAATGCTTGGAGTGGATTCTTCATTGTGATATAAAGCCCCATAATATCCTTTTGGATTCAAATTACCTACCCAAGGTAGCAGATTTCGGCTTATCTAAGCTTCAAAATCGGAATGATCAAAACTCTCAAAGCTTCTCTATGATTAGAGGAACAAGGGGATATATGGCACCTGAATGGCTTTTCAACCAGAGAATAACCTCAAAAGTGGATGTGTATAGCTATGGGATTGTTATGTTGGAGATGATAACAGGAAGGAGTCCAACGATGATGGAAATTCAGAACGACGAAGGCGAAGAGACACAAAGCAGGAGCCTTGTGACATGGGTGAGAGATAAAAGAAAGAAAACAACATCAGAGGAGGGGCCGTCGTCGTGGAGTTGGGTGGAGCAGATAATTGACACAACCATTATATCAGAGTATGGGGTTGAGAAGCGAAAGATGGAGACTTTGGCTGAAGTGGCTATGGAGTGTGTGGAAGAAGACAGGGATGCGAGGCCCAGCATGAGCCAAGTTGTTGAGATGCTTCAAAGCCATGAAGATGGTGCTTCTTAA 2418 0.4305 MAVSLMLHVPLLLSLFFQSSSSHNSRFSLSVEKPEDVILSQNGVFSAGFYLVGENAYVFSIWFAQTHAVVWTANRDRPINGKRSSLSIHRTGNLVLSDAGQYKVWSTDTTSSLPTQLILNNNGNLVLYEHQLRGSKILWQSFDFPTDTLLSGQQLTRYTKLVSARSETNYSSGFYKLVFDDENVLSLLYDGPDVSSKYWPSPWLKSWEVDRNIYNSGRIAVLDSLGRFSSTDMYNFTTSDYGVLIQRRLKLDPDGNIRVYSLHNNQWEVTWQAISDACIVHGLCGANSTCKYDPNEGRKCSCLPGYRVKNHSDWSYGCEPIFQLPRGRNESTFIKLPNVELYGNDLFQKENITYGECERKCLKDYECKSFQYSLASEGDPFHCFTKGVMLNGRHSPSFRGATYLRVPKNLSNNGLFHTVEEESAQENGRVCLVKLERVYSKRHVSSFVKFFLWFSVAIGVVEVLLIFIIWCSLIRTKHRSSRNQQGYNFLSPFGFKRFTYSELKQATKGFTEEIGRGSGGIVYKGALVDQRIAAIKKLNNNIVGAKQEEGEFLAEVRIIGRLNHMNLIEMWGYCAEGKHRLLVYEYLEKGSLAENLKSNTLDWTKRYNIALGTARCLAYLHEECLEWILHCDIKPHNILLDSNYLPKVADFGLSKLQNRNDQNSQSFSMIRGTRGYMAPEWLFNQRITSKVDVYSYGIVMLEMITGRSPTMMEIQNDEGEETQSRSLVTWVRDKRKKTTSEEGPSSWSWVEQIIDTTIISEYGVEKRKMETLAEVAMECVEEDRDARPSMSQVVEMLQSHEDGAS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2898g00004 805 CDD PAN_AP_plant 326 407 - -
Pral2898g00004 805 ProSiteProfiles Bulb-type lectin domain profile. 23 140 IPR001480 -
Pral2898g00004 805 FunFam S-receptor-like serine/threonine-protein kinase 476 586 - -
Pral2898g00004 805 PANTHER OS07G0415500 PROTEIN 7 799 - -
Pral2898g00004 805 Pfam Protein kinase domain 511 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2898g00004 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 202 IPR036426 -
Pral2898g00004 805 FunFam Putative receptor-like protein kinase 587 804 - -
Pral2898g00004 805 SUPERFAMILY Protein kinase-like (PK-like) 485 797 IPR011009 -
Pral2898g00004 805 ProSiteProfiles EGF-like domain profile. 274 312 IPR000742 -
Pral2898g00004 805 ProSiteProfiles Protein kinase domain profile. 508 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2898g00004 805 CDD B_lectin 38 145 IPR001480 -
Pral2898g00004 805 CDD EGF 278 311 - -
Pral2898g00004 805 Gene3D Hepatocyte Growth Factor 334 401 - -
Pral2898g00004 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Pral2898g00004 805 ProSitePatterns Protein kinases ATP-binding region signature. 514 537 IPR017441 GO:0005524
Pral2898g00004 805 Gene3D Phosphorylase Kinase; domain 1 471 586 - -
Pral2898g00004 805 SMART blect_4 29 145 IPR001480 -
Pral2898g00004 805 SUPERFAMILY Hairpin loop containing domain-like 329 376 - -
Pral2898g00004 805 ProSiteProfiles PAN/Apple domain profile. 318 407 IPR003609 -
Pral2898g00004 805 Pfam PAN-like domain 329 385 IPR003609 -
Pral2898g00004 805 Gene3D - 22 144 IPR036426 -
Pral2898g00004 805 PIRSF SRK 1 804 IPR024171 GO:0004674
Pral2898g00004 805 SMART serkin_6 508 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2898g00004 805 MobiDBLite consensus disorder prediction 783 805 - -
Pral2898g00004 805 CDD STKc_IRAK 514 798 - -
Pral2898g00004 805 Pfam D-mannose binding lectin 69 158 IPR001480 -
Pral2898g00004 805 Pfam S-locus glycoprotein domain 243 309 IPR000858 GO:0048544
Pral2898g00004 805 Gene3D Transferase(Phosphotransferase) domain 1 587 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2898g00004 Pral-Chr2898 28230 30820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2898g00004 456 802 Receptor kinase-like Gene Family AT1G56120 38.920 3.24e-62 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral2898g00004 Pkinase 1.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2898g00004 - - gmx:100784287 951.044