Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2896g00002 ATGCTGTCCACTCTCTCACCTTCCCACCCTTTCCTCGGGAACCCCTTCTCCTCCTTTGACGGCGGCCCAGCGCCGTGGGAGTTCCCGGACCTTATCTCTGTCTTCGATCCCATCGACCCCGTCACTAATTCAAGTTCCGGCTCAGACGAACCGGATCAAACCCATGCCAAGAGAAAATCCCCCTCCTCTGATGATCAACAGGACCCTCCAGATTCCGTCACGGAGGACCGAAAGCGGAGACGGATGATATCGAACCGGGAGTCGGCAAGACGTTCGCGCATGCGTAAACAGAGGCATCTAGAGAACTTACGGAACCAGCTGAACCGGTTTAGGGTGGAAAACCGGGACCTGAACAACCGGATGCAGTTCTTGCTTCACCTCACGAACCGCGTACGAACCGAAAACGAATGGCTCCGGTCCGAGCGAATCATGCTCCGGCAAAAACTGTCGACCCTAACTCAGTACTTGATGTTCCAACGACTGCAACCCGTCTCATCATCTGCATGGCCATGCAATACCAGCGTCACGGACAGAATAAACTTTGACCGTATATTATGA 558 0.5412 MLSTLSPSHPFLGNPFSSFDGGPAPWEFPDLISVFDPIDPVTNSSSGSDEPDQTHAKRKSPSSDDQQDPPDSVTEDRKRRRMISNRESARRSRMRKQRHLENLRNQLNRFRVENRDLNNRMQFLLHLTNRVRTENEWLRSERIMLRQKLSTLTQYLMFQRLQPVSSSAWPCNTSVTDRINFDRIL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2896g00002 185 Pfam bZIP transcription factor 75 129 IPR004827 GO:0003700|GO:0006355
Pral2896g00002 185 CDD bZIP_plant_GBF1 78 129 IPR045314 GO:0003700|GO:0006355
Pral2896g00002 185 Coils Coil 86 120 - -
Pral2896g00002 185 PANTHER BZIP TRANSCRIPTION FACTOR 44 37 159 - -
Pral2896g00002 185 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 75 138 IPR004827 GO:0003700|GO:0006355
Pral2896g00002 185 SMART brlzneu 73 137 IPR004827 GO:0003700|GO:0006355
Pral2896g00002 185 FunFam BZIP transcription factor 75 126 - -
Pral2896g00002 185 MobiDBLite consensus disorder prediction 51 90 - -
Pral2896g00002 185 MobiDBLite consensus disorder prediction 37 98 - -
Pral2896g00002 185 Gene3D - 76 157 - -
Pral2896g00002 185 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Pral2896g00002 185 SUPERFAMILY Leucine zipper domain 77 126 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2896g00002 Pral-Chr2896 16303 17152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2896g00002 1 160 bZIP Transcription Factor Family AT3G49760 36.364 1.70e-26 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral2896g00002 bZIP_1 1.2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2896g00002 - - pcin:129323153 302.367