Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2892g00003 ATGGGTTCTGCAGAGGATAAAATAGACCTTGACTCAGATGAGGAGATTGCTTTTAGACCGTCACCATCTTCAGGAAAAGTCCAGACTTTTGATTTTGAGACAGCACATGTACTTTCTCCTGGAAGCTTGGCCAGCTCATCCTTTAAGCGGATACAGATCCGACCCTTCAGGAGCATATATATTGTCCTATTTAAAGCAAAGATCAACATGTTGCTACCTTTTGGTCCATTGGCGATATTGCTACGTTATCTAACACAAAAGCATGGATGGGTGTTCTTTTTCAGCTTATTGGGTATTACTCCCTTGGCAGAACGTTTGGGATATGCTACTGAGCAGCTTGCATTGTATACTGGACCAACAGTTGGAGGTCTGCTAAATGCCACATTTGGCAATGCCACTGAAATGATTATATCCATTTATGCTTTGAAAAATGGGATGATTAGAGTTGTTCAGCAGTCTCTGTTGGGCTCAATTTTATCAAATATGCTTCTGGTTCTTGGATGTGCCTTCTTTACTGGAGGAATTGTCCACCACCATAAAGTTCAGCTTTTCAACAAGGCATCTGCTGTTGTAAATTCAGGGTTACTCTTGATGGCTGTGATGGGAATATTGTTTCCTGCTGTGCTTCACTTTACTCACTCTGAGGTTCATGTTGGAAAATCAGAGTTATCACTATCCAGATTTAGTAGCTGTATAATGCTAGTGGCATATGCAAGCTACCTTTTCTTTCAATTAAGAAATCAGCATAGTCTTTATAGCCCTATTGAGCAGGAGGATGGCAATAGTGAAAATGATGATGAAGAAGAAATTGAATTAACTCAATGGGAAGCAATAGGCTGGCTTGCTATTCTGACAGTATGGGTATCTGTATTGTCTGGATACCTTGTGGATGCCATAGAGGGGGCATCTGATTCATTGCATATGCCTGTGGCTTTTATTAGTGTCATATTGCTTCCAATTGTAGGCAATGCTGCTGAACATGCAAGTGCCATCATGTTTGCCATGAAGGATAAGCTTGATATCACACTTGGAGTTGCTATTGGATCTTCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTTGTTATTGGGTGGTGCATGGGAATAGAAATGGACTTGAATTTTCAACTCTTTGAGACCGCCACACTTTTTATCACTGTGCTTGTAGTTGCATTTATGTTGCAGGAAGGAACCTCGAACTATTTTAAAGGCTTGATGCTTATTCTTTGCTACCTCATTGTTGCAGCCAGTTTTTTTGTACATGTAGACCCTACAGATGGTAATAACTGA 1293 0.4045 MGSAEDKIDLDSDEEIAFRPSPSSGKVQTFDFETAHVLSPGSLASSSFKRIQIRPFRSIYIVLFKAKINMLLPFGPLAILLRYLTQKHGWVFFFSLLGITPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHHKVQLFNKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHVGKSELSLSRFSSCIMLVAYASYLFFQLRNQHSLYSPIEQEDGNSENDDEEEIELTQWEAIGWLAILTVWVSVLSGYLVDAIEGASDSLHMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWCMGIEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPTDGNN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2892g00003 430 Pfam Sodium/calcium exchanger protein 90 245 IPR004837 GO:0016020|GO:0055085
Pral2892g00003 430 Pfam Sodium/calcium exchanger protein 278 417 IPR004837 GO:0016020|GO:0055085
Pral2892g00003 430 NCBIfam calcium/proton exchanger 71 420 IPR004798 GO:0006816|GO:0015369
Pral2892g00003 430 FunFam Vacuolar cation/proton exchanger 119 258 - -
Pral2892g00003 430 FunFam Vacuolar cation/proton exchanger 265 421 - -
Pral2892g00003 430 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 42 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pral2892g00003 430 Gene3D - 119 421 IPR044880 -
Pral2892g00003 430 NCBIfam calcium/proton exchanger 62 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2892g00003 Pral-Chr2892 13367 20327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2892g00003 33 425 Antiporters AT1G55730 73.500 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2892g00003 K07300 - rcu:8260832 681.019