Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2892g00001 ATGGCTGCCACCGAGACCACCAAGCCCCAGAATGAGTTCATCTTCAGGTCCAAACTTCCCGACATCTACATCCCCAAACACCTTCCTCTTCATTCTTACTGCTTCGAGAATCTCTCCGAATTCGGTTCCCGTCCTTGCCTGATCAATGCTCCCACCGGCGATATCTACACTTACTACGACGTCGAGCTCACCGCCCGGCGAGTCGCCTCCGGATTGAACAAATTCGGCGTCGGACAGGGTGATGTCATCATGGTCCTCCTCAGCAATTCCCCTGAATTCGTCTTCTCCTTCCTCGGCGCCTCCTTCCGCGGGGCCATGACAACCGCCGCGAATCCGTTCTTCACCGCCGCGGAGGTTGCCAAACAAGCCAAAGCCTCCAACGCGAAGATCCTCATAACTCAATCAAGCTACTACGAGAAAGTGAAGGACCTGGACGTGAAGCTAATCTTCGTCGATTCTCCACCAGATGGACATTCACATTTCTCAGAGCTATCTCAAGCCGACGAGAACGATATTCCCGAGGTGGAAATCAAACCTGACGACGTCGTCGCCTTGCCGTATTCCTCCGGCACCACCGGTTTACCAAAAGGCGTGATGCTCACCCACAAGGGATTAGTCACCAGCATAGCCCAACAAGTCGACGGGGAGAATCCGAACCTGTATTTCCACCATGAAGATGTGATTCTCTGCGTGCTGCCCCTGTTTCATATCTATTCTCTGAACTCTGTTTTGCTGTGTGGATTGAGGGCGAAGGCGTCGATCATGTTGATGCCCAGGTTTGAAATCAATGCGTTGTTGGGTCTGATACAGAAACACAAGGTGTCGATCGCTCCGGTGGTGCCGCCGATCGTGCTGGCGATCTCAAAGTCGCCGGATACTGATAAGTACGACCTGTCGTCGATCAGAGTATTGAAGTCCGGTGGAGCTCCGCTGGGTAAAGAACTTGAGGACTCCGTAAGAGCCAAGTTCCCTAAGGCCAAACTCGGTCAGGGATATGGGATGACGGAGGCAGGACCGGTGTTAACAATGAGCTTAGCTTTTGCCAAACAACCCATGGAAGTGAAGGCCGGAGCATGTGGAACGGTGGTCAGAAATGCCGAAATGAAGATCGTGGATCCTGAGACCTCCGAGTCTTTGCCTCGTAATCAGCCCGGCGAGATCTGCATTAGAGGCGATCAAATTATGAAAGGGTATCTGAATGATCCGGAGGCAACGAAGAGAACGATAGATGCGGAGGGGTGGTTGCACACGGGGGACATAGGCTACATTGATGAGGACGATGAGCTGTTCATCGTTGATAGGCTGAAGGAGCTCATCAAGTACAAGGGCTTCCAGGTGGCCCCCGCTGAACTCGAGGCCCTCCTTCTCACTCATCCTCACATCTCCGACGCCGCCGTCGTCCCAATGAAGGATGAAGCAGCTGGGGAGGTTCCCGTTGCTTTTGTGGTCAGATCCAACGGTCACACTGAAACCACCGAGGATGATGTCAAACAGTTTGTCTCAAAACAGGTGGTGTTTTACAAGAGAATAAGCAAAGTGATATTCATAGATGCAATTCCAAAGTCACCATCAGGCAAGATCTTAAGAAAGGATCTAAGAGCAAAACTTGCTGCTGCTGCTGCTAAGAATTGA 1632 0.519 MAATETTKPQNEFIFRSKLPDIYIPKHLPLHSYCFENLSEFGSRPCLINAPTGDIYTYYDVELTARRVASGLNKFGVGQGDVIMVLLSNSPEFVFSFLGASFRGAMTTAANPFFTAAEVAKQAKASNAKILITQSSYYEKVKDLDVKLIFVDSPPDGHSHFSELSQADENDIPEVEIKPDDVVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYFHHEDVILCVLPLFHIYSLNSVLLCGLRAKASIMLMPRFEINALLGLIQKHKVSIAPVVPPIVLAISKSPDTDKYDLSSIRVLKSGGAPLGKELEDSVRAKFPKAKLGQGYGMTEAGPVLTMSLAFAKQPMEVKAGACGTVVRNAEMKIVDPETSESLPRNQPGEICIRGDQIMKGYLNDPEATKRTIDAEGWLHTGDIGYIDEDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPHISDAAVVPMKDEAAGEVPVAFVVRSNGHTETTEDDVKQFVSKQVVFYKRISKVIFIDAIPKSPSGKILRKDLRAKLAAAAAKN 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2892g00001 543 FunFam Long-chain-fatty-acid--CoA ligase FadD 16 436 - -
Pral2892g00001 543 ProSitePatterns Putative AMP-binding domain signature. 185 196 IPR020845 -
Pral2892g00001 543 CDD 4CL 24 532 - -
Pral2892g00001 543 Gene3D - 436 540 IPR045851 -
Pral2892g00001 543 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 534 - -
Pral2892g00001 543 Pfam AMP-binding enzyme C-terminal domain 450 526 IPR025110 -
Pral2892g00001 543 SUPERFAMILY Acetyl-CoA synthetase-like 13 538 - -
Pral2892g00001 543 Gene3D - 8 435 IPR042099 -
Pral2892g00001 543 FunFam 4-coumarate--CoA ligase 2 437 539 - -
Pral2892g00001 543 Pfam AMP-binding enzyme 38 441 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2892g00001 Pral-Chr2892 985 5631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2892g00001 5 504 Monolignol Biosynthesis Gene Families AT1G51680 70.508 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2892g00001 K01904 - qsa:O6P43_027979 890.182