Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2891g00004 ATGGTACAATCAAAGAAGTTCAGAGGAGTAAGGCAGCGCCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCATCCTCTGCTAAAGAGAAGGGTGTGGCTGGGGACATTTGAGACGGCAGAGGCAGCAGCGAGGGCATATGATCAAGCAGCCATTTTGATGAATGGTAGAAATGCAAAGACAAATTTCCCAGCTCCATTGAATGAAGCTGAAGATGGAGGAGGGTCTTTCTTGTCTCCCAAGGCTCTCTCAGAGCTGTTATCCACAAAGCTTAAGAAATGCTGCAAGGACCCATCTCCTTCCCTCACTTGTCTCAGGCTTGATTCTGATAATTCTCACATTGGTGTGTGGCAAAAGAGACCAGGACCTCGCTCGGATTCCAATTGGGTCGTCAGGGTAGAGCTTGGCAAGAAACAAGCACAGCAAGGTGATGATAAAACTGCTGCAGACGCCATTAGCAGTGAAGCTGCAAGCGAGGTGGAAGATGAAGAGGCAATGCAGATGATTGATGAGCTTCTTGATTGGAACTATCCGTGTGATTTCTCCAGTAGCCCTTAA 555 0.4829 MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGRNAKTNFPAPLNEAEDGGGSFLSPKALSELLSTKLKKCCKDPSPSLTCLRLDSDNSHIGVWQKRPGPRSDSNWVVRVELGKKQAQQGDDKTAADAISSEAASEVEDEEAMQMIDELLDWNYPCDFSSSP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2891g00004 184 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 148 - -
Pral2891g00004 184 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Pral2891g00004 184 MobiDBLite consensus disorder prediction 136 162 - -
Pral2891g00004 184 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Pral2891g00004 184 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Pral2891g00004 184 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Pral2891g00004 184 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Pral2891g00004 184 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Pral2891g00004 184 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Pral2891g00004 184 CDD AP2 5 64 IPR001471 GO:0003700|GO:0006355
Pral2891g00004 184 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2891g00004 Pral-Chr2891 32607 33937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2891g00004 1 177 AP2-EREBP Transcription Factor Family AT5G25390 62.637 3.00e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral2891g00004 AP2 1.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2891g00004 - - lang:109326202 257.684