Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2889g00003 ATGAGGTGTCCGTTTCAAAGTCGTCTTCTTCTTCATCTTCAATTTCCTTCTGTGGTCGTCTTTCTCTGGTATTGTGCCGTACTCATCATCTTTCAACAAAGCACTTCTTCTTCTTCTGCTGTTGTGAGTCTACCAAACAATGAAACAATCCCAGCGGTAATTGTGTTTGGAGACTCCATTGTTGATGCTGGTAACAATAACTTCATAACCACTTTGGTTAAGTGCAATTTCTTACCTTATGGCAAAGATTTTGGTACCGGAGATCTTCCTACAGGGAGGTTTAGCAATGGTTTGGTGCCATCAGATATCATTGCTGCAAAATTTGGGGTGAAGCAACTTTTGCCACCATATCTTGATCCTAATCTGAAACTAGATGATCTTCTCACTGGTGTGAGCTTTGCTTCTGGTGGTGCTGGATATGATCCTCTCACTGCAGAACTAGTGTCGGTGATACCATTATCAGGTCAACTGGACATGTTCAGAGAGTACAAGAAGAAGATAAAAGAAGGAGTTGGAGAAAGCAAAGCAGGAAGCATTGTATCAAAGAGCATATACATAGTGTGTATAGGAAGTGATGACATTGCCAATACTTATACTCAATATGGCATCAGGAGAGCTCAGTATGATATTTCATCATACACTGACTTCATGGCTGCCCAAGCCTCAAGCTTCTTCCAAGAACTTTATGGATTAGGAGCAAGAAGGATTGGGGTGTTCAACTTACCCGTTTTAGGGTGTGTGCCCTCACAGAGAACAATAGGAGGAGGCCTAGAGAGAGATTGCTCAGACTTTGAGAACCAAGCAGCTGTCCTATTTAACTCTAAACTCTCCTCTCAGATTGATATGCTTAACAAAAACTTGCCAGACGCCAGGCTTGTTTACTTGGATTGCTATACCTCACTTCTTCATATGCTTCAACATCCAGCTCAATATGGATTTGAAGTAACAGAGAAAGGATGCTGTGGTAGTGGAGACATAGAGGTGAGCATTACGTGCAACCCTTACACTCTAGAGTTATGTTCAAATGACTCAGCCTACATTTTCTGGGACAGCTACCATCCAACACAGAAGGCCTATTCCATCCTTGCTTCCCTTGTGCTTGACCCCAAAATCAAGGATTTCTTCTAA 1128 0.422 MRCPFQSRLLLHLQFPSVVVFLWYCAVLIIFQQSTSSSSAVVSLPNNETIPAVIVFGDSIVDAGNNNFITTLVKCNFLPYGKDFGTGDLPTGRFSNGLVPSDIIAAKFGVKQLLPPYLDPNLKLDDLLTGVSFASGGAGYDPLTAELVSVIPLSGQLDMFREYKKKIKEGVGESKAGSIVSKSIYIVCIGSDDIANTYTQYGIRRAQYDISSYTDFMAAQASSFFQELYGLGARRIGVFNLPVLGCVPSQRTIGGGLERDCSDFENQAAVLFNSKLSSQIDMLNKNLPDARLVYLDCYTSLLHMLQHPAQYGFEVTEKGCCGSGDIEVSITCNPYTLELCSNDSAYIFWDSYHPTQKAYSILASLVLDPKIKDFF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2889g00003 375 CDD SGNH_plant_lipase_like 51 368 IPR035669 -
Pral2889g00003 375 PANTHER GDSL ESTERASE/LIPASE EXL3 25 364 - -
Pral2889g00003 375 FunFam GDSL esterase/lipase APG 42 371 - -
Pral2889g00003 375 Pfam GDSL-like Lipase/Acylhydrolase 53 365 IPR001087 GO:0016788
Pral2889g00003 375 Gene3D SGNH hydrolase 40 370 IPR036514 -
Pral2889g00003 375 SUPERFAMILY SGNH hydrolase 52 368 - -
Pral2889g00003 375 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 53 64 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2889g00003 Pral-Chr2889 90497 95583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2889g00003 27 370 Pollen Coat Proteome AT1G75910 38.000 5.43e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2889g00003 - - gmx:102668883 526.554