Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2888g00004 ATGGGTTCTCCGAGCTCAATGAGCCGTTGTGTTCTGGTTTTGGTGGTTCTGCTCTTGGGGAGTACTGTGAACGCACAGCTTTCTGCAGACTTTTACGCGAGATCTTGCCCTCAACTTCCCTACATTGTGAATCGTGCAGTGCATTCCGCCATTGCCAAGGAGGCACGCATGGGTGCTTCTCTTCTTCGCTTGTTCTTCCACGACTGCTTTGTTAATGGGTGTGATGGTTCGATTCTTCTGGATGACACGTCCAATTTCAAGGGAGAGAAGGGCGCAGTGCCCAACAAGAACTCAGCTCGCGGCTTCGAAGTGATCGACGCCATCAAGTCGGAGGTCGAGAAAGCGTGCCCAGGCATCGTCTCCTGTGCCGACATTCTCGCCGTCACCTCCAGAGACTCCGTCCACCTTCTTGGAGGGCCATACTGGGACGTGAAGCTCGGAAGAAGAGACGCCAGAATCACCAGTCTCTCTGCCGCAAACAACGGTATCCCACCACCCACCTCTAACCTCAACCAACTCATATCCAGATTCTCCTCACTCGGTCTCTCCACCAAGGACTTGGTCGCTCTCTCTGGTGGGCACACGATTGGACAAGCGAGATGCACTAATTTCAGGGCTCACATATACAACGAGAGCAACATATACGCAGGTTTCGCTCGCACCAGGCAAACGAACTGCCCCAGGGTCTCAGGTACAGGGGACAACAATCTGGCTCCTCTTGATTTAGCGAGTCCCACTTACTTCGACAACAGCTACTTCAAGAACCTGGTTCAGAAGAAAGGGCTTCTTCACTCCGATCAGGAGCTCTTCAATGGCGGATCCGTCGACTCCATTGTGCAAGGCTACAGCGCCAACCTCAGATCCTTCGCTGAGGATTTCGTTGGAGCCATGATCAAGATGGGCGACATCTCCCCCCTCACTGGCTCTCAGGGCGAGATCAGGAAAAACTGCAGGAGGGCCAACTAA 966 0.5352 MGSPSSMSRCVLVLVVLLLGSTVNAQLSADFYARSCPQLPYIVNRAVHSAIAKEARMGASLLRLFFHDCFVNGCDGSILLDDTSNFKGEKGAVPNKNSARGFEVIDAIKSEVEKACPGIVSCADILAVTSRDSVHLLGGPYWDVKLGRRDARITSLSAANNGIPPPTSNLNQLISRFSSLGLSTKDLVALSGGHTIGQARCTNFRAHIYNESNIYAGFARTRQTNCPRVSGTGDNNLAPLDLASPTYFDNSYFKNLVQKKGLLHSDQELFNGGSVDSIVQGYSANLRSFAEDFVGAMIKMGDISPLTGSQGEIRKNCRRAN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2888g00004 321 ProSiteProfiles Plant heme peroxidase family profile. 26 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 SUPERFAMILY Heme-dependent peroxidases 26 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 CDD secretory_peroxidase 26 319 IPR033905 GO:0004601|GO:0042744
Pral2888g00004 321 Gene3D - 30 318 - -
Pral2888g00004 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Pral2888g00004 321 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 FunFam Peroxidase 164 300 - -
Pral2888g00004 321 PANTHER PEROXIDASE 72-RELATED 23 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral2888g00004 321 Gene3D Peroxidase, domain 2 164 300 - -
Pral2888g00004 321 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Pral2888g00004 321 FunFam Peroxidase 30 171 - -
Pral2888g00004 321 Pfam Peroxidase 44 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2888g00004 Pral-Chr2888 29853 31735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2888g00004 23 321 Peroxidase AT5G05340 71.237 6.19e-160 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2888g00004 K00430 - qsa:O6P43_020124 482.641