Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2887g00002 ATGCCTTCACGCCCCTCTCCCTCATTTGAATTCAAACCCGAGCAGAGCTTCTCGTCTTCCTCTCATTTCATGACGACCTCCTTCACAGAACTCCTTTCCATGGATGATCGCTGGACTTCTTCTGAAATCCCCAAATTCAAGTCAACCCCGCCTCCTTCTCTGCCCCTTTCTCCCTCCCCTCTCTCCCCTTCCTCTTACTTGTCTTTCCCTTCCGGGTTCAGCCCCACCCAGTTCTTGAGCTCCCCCTTGTTCCTTTCATCCCCAAATGGTCTTCCTTCTACTGAGACGTTTGATAACAAGGAGGAGCAGCAGAAACCATTCTCTGACTTCTCCTTCCAAACCCAATCCAAGCCGTTGTCCTTCTCGGAGTATTCTTCGAGCATGTTTCAGGCGCAGGAACCACTGAAACAAGAACCATGGAATGACCAGACAGCTACAAAATCTGAGTATCCATCATTCTCCTCAGAACCACAGATACAAACCAATTTGGCTCCCGCTTCTGGTTATACGAACTACTCAAATTCGTCCCAGTCCATAAGAGAGCAAAAGAGGTCAGATGATGGGTACAACTGGAGAAAATATGGACAGAAACAGGTGAAGGCAAGCGAAAATCCTCGCAGTTATTACAAGTGCACGCATCCCAGTTGCAACATGAAGAAGAAGGTTGAAAAGTCCCCGGATGGACAAATTACTGAGATAGTATATAAGGGAACGCATAACCATCCCAAGCCTCAGTCCACTAGAAGATCTAGTTCTCAATCAATTCAACCTTCTTCCTCTTGTACCAATTCTGGTGTTTCTGATCAATCGGCGGTGACCCTGGGGAATCTGCAAATGGACCGGGCCTCTCTGCAAGAAGATTCTTCTGTCTCTGTTGGGGAAGATGACTTCGAGAACACATCACAAGCATGTTACTCTGGGGGTGATGACAATGACTATGGCCCGGATGCCAAAAGATGGAAAGGGGAGAATGAAATTGATTGCTATGCCTCCTCCGGGAATAGGACTGTGAGGGAACCAAGAGTCGTGGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGCTACAGATGGAGGAAATATGGTCAGAAAGTAGTTAAAGGAAACCCAAACCCAAGGAGTTACTACAAGTGCACAGCTCCAGGCTGTTCAGTGAGGAAACATATAGAGCGAGCTGCTCATGATCTGAAAGCTGTGATCACAACGTACGAAGGGAAACACAACCATGATGTTCCTGCAGCACGAGGGAGTGGGAGTTATAACCTGAACGCAGCTTCTCTGAACAACAACACCACCAGCAACAATGTAACCGCGCCAATAAGGCCATCGGCGTCTTCTGCACTGACCAGCTTTTCAGGCAAACCAAGCTTCACACATTCGCTTCATAACACAAGCCAGCCAACACCTGCAAATCAAGAACCATTCCCATTTGACATGTTGCAGAGCCCAGCAAGTTTTGCATACTCCGATTTCGTCAGATCAATGGGATCGTACAACACTGATGCATGA 1512 0.4729 MPSRPSPSFEFKPEQSFSSSSHFMTTSFTELLSMDDRWTSSEIPKFKSTPPPSLPLSPSPLSPSSYLSFPSGFSPTQFLSSPLFLSSPNGLPSTETFDNKEEQQKPFSDFSFQTQSKPLSFSEYSSSMFQAQEPLKQEPWNDQTATKSEYPSFSSEPQIQTNLAPASGYTNYSNSSQSIREQKRSDDGYNWRKYGQKQVKASENPRSYYKCTHPSCNMKKKVEKSPDGQITEIVYKGTHNHPKPQSTRRSSSQSIQPSSSCTNSGVSDQSAVTLGNLQMDRASLQEDSSVSVGEDDFENTSQACYSGGDDNDYGPDAKRWKGENEIDCYASSGNRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAPGCSVRKHIERAAHDLKAVITTYEGKHNHDVPAARGSGSYNLNAASLNNNTTSNNVTAPIRPSASSALTSFSGKPSFTHSLHNTSQPTPANQEPFPFDMLQSPASFAYSDFVRSMGSYNTDA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2887g00002 503 FunFam WRKY transcription factor 173 245 - -
Pral2887g00002 503 FunFam WRKY transcription factor 33 340 406 - -
Pral2887g00002 503 MobiDBLite consensus disorder prediction 447 473 - -
Pral2887g00002 503 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 80 435 IPR044810 GO:0003700
Pral2887g00002 503 MobiDBLite consensus disorder prediction 123 179 - -
Pral2887g00002 503 MobiDBLite consensus disorder prediction 41 64 - -
Pral2887g00002 503 ProSiteProfiles WRKY domain profile. 180 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2887g00002 503 MobiDBLite consensus disorder prediction 1 21 - -
Pral2887g00002 503 ProSiteProfiles WRKY domain profile. 348 413 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2887g00002 503 SUPERFAMILY WRKY DNA-binding domain 345 413 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2887g00002 503 SMART WRKY_cls 353 412 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2887g00002 503 SMART WRKY_cls 185 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2887g00002 503 MobiDBLite consensus disorder prediction 89 109 - -
Pral2887g00002 503 SUPERFAMILY WRKY DNA-binding domain 181 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2887g00002 503 Gene3D WRKY domain 170 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2887g00002 503 Gene3D WRKY domain 340 406 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2887g00002 503 Pfam WRKY DNA -binding domain 354 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2887g00002 503 Pfam WRKY DNA -binding domain 186 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2887g00002 503 MobiDBLite consensus disorder prediction 240 267 - -
Pral2887g00002 503 MobiDBLite consensus disorder prediction 447 474 - -
Pral2887g00002 503 MobiDBLite consensus disorder prediction 123 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2887g00002 Pral-Chr2887 25880 28408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2887g00002 42 480 WRKY Transcription Factor Family AT2G38470 48.017 1.65e-110 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2887g00002 WRKY 2.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2887g00002 K13424 - gmx:100776837 519.62