Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2885g00027 ATGAGGAAGAAAAGGAAAGGAAGCGAGACAGATGCGTCCTCAAATCTTCCAGAAATTTTGACTTCACATCATGGGAACCATGGATCTCTCTCATCAAATTGGAAGTCTCATTACTCGCTTGAAGATTGTTCCAGATTGAAGAAGAGGTGTAAAGAAGATGCTGGTGCAGAACCGGTTGCTTCCTGTAATAAAAGGCTTGCAGGCTTTGCCACCGCTCCCCCTTGTGGGACATCATCTTTGATCACGCCTGGAAGAGGTCTTAAGAGGAAGATAGGATGCATTGATGTTGCTACCCAAATGGGCAGGAAGAAAAAGATAGAGGATGATTATATTTTTGGTAAAACGATTGGGCAAGGAAAATTTGGATCTGTATCTTTGTGTCGGTCCAGCCTTAGTGGAGCAGAATATGCATGTAAGACCCTGAGGAAGGGGGAAGAGACGGTTCATCGAGAAGTGGAGATAATGCAACATTTATCTGGACATCCAGGGGTTGTGACGCTGCAGGCAGTGTATGAAGAAGCTGACTGCTTCCATCTTGTAATGGAGTTGTGTTCTGGGGGGCGATTGATTGATAGGATGGTTGAGGAGGGCCCTTATACAGAGCAAAGGGCTGCTACTGTGCTCAAGGAAGTGATGTTAGTCATTAAGTATTGTCATGATATGGGAGTTGTGCACAGAGATATCAAACCTGAAAATATCCTGCTAACAGCATCGGGAAAAATAAAGCTTGCAGATTTTGGGCTGGCCATGAGAATATCTAATGGTCAGAACTTGACTGGCTTGGCTGGAAGCCCTGCATATGTTGCTCCGGAGGTATTGCTGGGTAGCTATTCTGAGAAGGTGGATGTGTGGAGTGCTGGAGTTCTCCTGCATACTCTGTTAGTTGGCTTTCTTCCATTTCATGGAGATTCGTTGGAAGCAGTCTTTGAGGCTATTAAGAATGTCAAACTGGATTACCAAAAGGGTATGTGGGATTTGATATCTAAGCCTGCCCGAGATCTTGTAGGGAGGATGCTGACAAGGGATGTTCTAGCAAGGATAACCGCTGATGAAGTACTAAGGCATCCATGGTTACTATTCTACACAGAACCTACTTTAGAAAAACTGCCTATCAGAACAAGGTTGAAGCATCAGGTAGGAGCCACGTGCCGCCAGTTTATTGCTGCTGGACATAGGCCAGGAGGAAACAAGATAGACGATGGTTCCCATGGTGAAATTTCAAGCCCGCTTTCACCCTCGGAGAGTAGCGATTCAGAAGATGAGGGCGATGGTGTGTTGATTGATGTGCTGGCGTCTGCAATTTCACATGTGAGGATATCCGAACCCAAGAGAAGCAGGTTGTGCGGACCAACAGGTCCAATGGATCAGCAAGGATCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1416 0.4562 MRKKRKGSETDASSNLPEILTSHHGNHGSLSSNWKSHYSLEDCSRLKKRCKEDAGAEPVASCNKRLAGFATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYIFGKTIGQGKFGSVSLCRSSLSGAEYACKTLRKGEETVHREVEIMQHLSGHPGVVTLQAVYEEADCFHLVMELCSGGRLIDRMVEEGPYTEQRAATVLKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISNGQNLTGLAGSPAYVAPEVLLGSYSEKVDVWSAGVLLHTLLVGFLPFHGDSLEAVFEAIKNVKLDYQKGMWDLISKPARDLVGRMLTRDVLARITADEVLRHPWLLFYTEPTLEKLPIRTRLKHQVGATCRQFIAAGHRPGGNKIDDGSHGEISSPLSPSESSDSEDEGDGVLIDVLASAISHVRISEPKRSRLCGPTGPMDQQGSSNMKANNLCKAF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2885g00027 471 Gene3D Transferase(Phosphotransferase) domain 1 101 388 - -
Pral2885g00027 471 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Pral2885g00027 471 CDD STKc_CAMK 109 357 - -
Pral2885g00027 471 MobiDBLite consensus disorder prediction 1 28 - -
Pral2885g00027 471 MobiDBLite consensus disorder prediction 12 28 - -
Pral2885g00027 471 ProSiteProfiles Protein kinase domain profile. 110 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2885g00027 471 SUPERFAMILY Protein kinase-like (PK-like) 101 377 IPR011009 -
Pral2885g00027 471 MobiDBLite consensus disorder prediction 391 421 - -
Pral2885g00027 471 MobiDBLite consensus disorder prediction 443 465 - -
Pral2885g00027 471 Pfam Protein kinase domain 112 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2885g00027 471 FunFam Serine/threonine-protein kinase PEPKR2 101 425 - -
Pral2885g00027 471 PANTHER SERINE/THREONINE-PROTEIN KINASE 97 382 - -
Pral2885g00027 471 SMART serkin_6 110 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2885g00027 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2885g00027 Pral-Chr2885 79902 83536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2885g00027 110 358 EF-hand Containing Proteins AT3G20410 45.174 3.01e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral2885g00027 Pkinase 1.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2885g00027 - - pcin:129303422 864.374