Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2885g00014 ATGGTCGCCCTTCTTCTCTCCCTCCTCCTTCTTCTTCACTCCTCTTTCCCTTCCTCCGCACAGCCCACATTAACCCCTCCTTCCTCTCCTCCGGCCGATTCATCATCGCAGCTCCGGTTCGATAAATCCATGGCCATTGTTTTGGTCATCCTCATCGTCGTCTTCTTCGCCTTGGGCTTCCTCTCCGTCTACTCTCGTCAATGCGCAGAGCGACGATTCCGAGGAACCGACGATTTCCCGATTGGGAACAGCGAGCGCCACCCCCGCGGCCTTGACCCCGAAATCATCCGCACCTTCCCCACCTTCGTCTACTCCACCGTCAAGGGCCTTAAAATTGGGAGAAGTACTCTGGAATGCGCCGTCTGCTTGAACGAGTTTCAAGACCACGAGACTCTCCGTTTCATTCCCAAGTGCAGTCACGTCTTCCACCCCGGTTGCATTGACCTCTGGTTATCCTCTCACTCTACCTGCCCTGTTTGTCGGGCCAACCTCGTTCCCAGACCGGGAGAAGTCTCCTTCGTCGCCGTCCAGATGCCCGACTCTCCCGCTGAATCCGAGCACCAACAACACGCCAGCGATATCATCCAACATGATCAACAAGTAGGTGAATCATCCCCCAAGAACAGAGACATCGTCTATCAGAATCCTCCGCCGAGGTCAGGGATTGCGAGCTTGTTTCCACGATCACACTCGACAGGACACTCGCTGGTTTCTGCGGTGGAGGACCGCGAGAGGTTTACTTTAAGATTGCCGGAGGAGGTGAGGAAGGGGCTTATGCGGCCGGCATTTGAGAGAATGAGCAGTGAGAGAAGTGGTTACAGGACAAGAAGCGTGGGGAGTGGAGTTGGGCGGTTCGAGCGGTTCAGGAGGGAGGGGCGGTCCGACTGGTGGGGGTTCCTCCATAGGAATGCTTCGTCGAGGGAGAGCAGCAAGAAGCCACATGCGGCCATGGAAAACTTGGAGGAAAGATCAACGGATCGGTTATGTGCAGAGCCAAGGCAGGATTAG 1008 0.5595 MVALLLSLLLLLHSSFPSSAQPTLTPPSSPPADSSSQLRFDKSMAIVLVILIVVFFALGFLSVYSRQCAERRFRGTDDFPIGNSERHPRGLDPEIIRTFPTFVYSTVKGLKIGRSTLECAVCLNEFQDHETLRFIPKCSHVFHPGCIDLWLSSHSTCPVCRANLVPRPGEVSFVAVQMPDSPAESEHQQHASDIIQHDQQVGESSPKNRDIVYQNPPPRSGIASLFPRSHSTGHSLVSAVEDRERFTLRLPEEVRKGLMRPAFERMSSERSGYRTRSVGSGVGRFERFRREGRSDWWGFLHRNASSRESSKKPHAAMENLEERSTDRLCAEPRQD 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2885g00014 335 CDD RING-H2_EL5-like 118 161 - -
Pral2885g00014 335 PANTHER RING FINGER DOMAIN-CONTAINING 23 172 - -
Pral2885g00014 335 MobiDBLite consensus disorder prediction 305 335 - -
Pral2885g00014 335 MobiDBLite consensus disorder prediction 302 335 - -
Pral2885g00014 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 166 IPR013083 -
Pral2885g00014 335 SMART ring_2 119 160 IPR001841 -
Pral2885g00014 335 Pfam Ring finger domain 118 161 IPR001841 -
Pral2885g00014 335 FunFam E3 ubiquitin-protein ligase ATL6 81 167 - -
Pral2885g00014 335 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Pral2885g00014 335 SUPERFAMILY RING/U-box 113 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2885g00014 Pral-Chr2885 41059 42401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2885g00014 4 260 Rapid Response to Elicitors AT3G05200 40.370 6.30e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2885g00014 K10664 - gmx:100807828 278.87