Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral287g00010 ATGACGGTGGCGTCGGATTCTTCTCCAGAGTCTTTCAGCCAGATGATGGCTTCCATGCCGGGGTTTCGATTCCATCCTACCGATGAGGAACTAGTTATGTACTATCTGAAGAGGAAGATGTGTAGGAGGAGGCTGAAGCTGGATGTAATTCGTGAAACTGATGTCTACAAATGGGATCCTGAGGAATTGCCAGGGCAGTCAGTGCTGAAAACTGGAGAGAGGCAATGGTTCTTTTTCAGCCCTAGAGACAGAAAGTATCCTAATAGTGGTAGGACTAACCGAGGAACAAGACATGGGTACTGGAAAGCAACAGGGAAGGATCGTAACATTACCTACAATTCTCGGGCAGTTGGGGTGAAAAAGACTTTGGTTTTCTATAGAGGTAGAGCACCACATGGTGAGCGAACTGATTGGGTTATGCATGAGTACACATTGGAGGAAGAAGAACTTGCAAGATGCCAGAATTGTAAGGACTATTATGCACTTTACAAGGTGTTCAAGAAAAGCGGACCTGGTCCTAAAAATGGTGAACAGTATGGTGCACCATTTGTAGAAGAAGAATGGGTAGATGATGACTTCGTAGATTTTAATGTTAACTCAGCCGGCAAGGAGGTTCCAATTTCACAAGTTGATAAGGGTACTACTGTTGATACTGTGACTGGTAATGGTCAAGTGCAGCCTTTGTTTGATGATGAACTTGATGAGATCTTGAAGAAAATGATGGATGAGCAGGTCCCTGATCTGCCCTCGCTGTGTCCTGCCTTACCTCAGGTCGCTGCTGAAGAAACGCAGAGTGTGGTGGTGGATCAAATTTCTAATGAGGCAGCATTTGCTGAGCCAATCCATCTGTTTCATTCAAGCGGTCACTACTATGACCCTACCCAATCAACTACATCTCATGTGCATGTTTCTGAAGCACCTGAAGTCACTTCTGCTGCCAGCGTTCAAGTAGAGGAGCCTCTCTTTCATGAGGATGACTTCTTGGAAATGAATGATCTCATTGATCCTGAACCAGCATTGCCAAAAATAGAAAATCCTGTGGAGAACTTGGAGTTTGAAGAGGGATTAAGTGCACTTGACTTGTACCATGATGCAGAGATGTTTCTTCGCGACATGGGGCATATTGACCAGGAAACTATTTCACATCCTTATATGAATACTTTTGAGAGTAATGTTGTGAATCAGCATTATCAGTCTCTGCCCCTAGGAGACAATGCGGATCAAAGTGGTGAACTCTGGATGTGTCATGAAAGGCCTATGATGAGTCCAGCAGAACATGCAAATGATGTTTCTTTCGCTTCATCAACCTCAGGTGTGGGTTATGAATCTGCTAGCTTGCCTGCTGAAGGTAATCATAATCAAAGTAGCAGTGTGAGACAAGCTCCTACAAGTAGATTGTCTTCTGCTCTCTGGGCCTTCCTTGAGTCAATACCTACCACTCCTGCATCAGCGGCCGAAAATGCAAATCGGGCTCTTGAGCGGGTGTCTAGCTTTAGTAGGGTGAGAGATAATATGAAGCAGGCAAGCACAGCTGCCGCCGCAGCTGCTAATGAAACTGCGATTGTGAAGAGAGCAGGTAAAGGAAGGGGAATCTTCTGGTTCTTGCCGGTTCTTATTGCTTTATGTGCTTTTTTATGGGCTTCTATGGGGACATTGAGGCTACCTGGGAGATCCATCCCTTGA 1683 0.4528 MTVASDSSPESFSQMMASMPGFRFHPTDEELVMYYLKRKMCRRRLKLDVIRETDVYKWDPEELPGQSVLKTGERQWFFFSPRDRKYPNSGRTNRGTRHGYWKATGKDRNITYNSRAVGVKKTLVFYRGRAPHGERTDWVMHEYTLEEEELARCQNCKDYYALYKVFKKSGPGPKNGEQYGAPFVEEEWVDDDFVDFNVNSAGKEVPISQVDKGTTVDTVTGNGQVQPLFDDELDEILKKMMDEQVPDLPSLCPALPQVAAEETQSVVVDQISNEAAFAEPIHLFHSSGHYYDPTQSTTSHVHVSEAPEVTSAASVQVEEPLFHEDDFLEMNDLIDPEPALPKIENPVENLEFEEGLSALDLYHDAEMFLRDMGHIDQETISHPYMNTFESNVVNQHYQSLPLGDNADQSGELWMCHERPMMSPAEHANDVSFASSTSGVGYESASLPAEGNHNQSSSVRQAPTSRLSSALWAFLESIPTTPASAAENANRALERVSSFSRVRDNMKQASTAAAAAANETAIVKRAGKGRGIFWFLPVLIALCAFLWASMGTLRLPGRSIP 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral287g00010 560 FunFam Nac domain-containing protein 86 27 171 - -
Pral287g00010 560 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Pral287g00010 560 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Pral287g00010 560 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Pral287g00010 560 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Pral287g00010 560 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral287g00010 Pral-Chr287 329676 333860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral287g00010 5 559 NAC Transcription Factor Family AT1G34190 45.734 2.21e-148 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral287g00010 NAM 4.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral287g00010 - - gmx:100794925 637.491