Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2876g00004 ATGGGGGACGATGCAGCTCTGAATTGCAATGGAACCCAGGGCGGTCATAAGTTTGCACCAGAGGAGGCTGTGTTCCACGAGGGAAACAGTCTTCTAGACATGAAATTTACAGAAGAGATGAATGCTCTCCCTATCGAGAATCATGAGAAAGAAACATATTCACATCAAAATCGAAGTCATGAACCTAAATTTGACGACTTGATGCTGGAAGAGTTCAGCTTTGACTTTCTTCTGCAACCGCCACAAGCGTTTGAGGAAACGGTTGAGGTAAACAATAAAGCAGTGGCGAGTTCTGAATCCGTCAAGTACAACGATAAGCCAGTCCCTCCAGCATCTTCAATCCTGGCTTCCTTGGAGCTCTTAAACAATTACAAAAGCAGGCTCAGGAGACTGAAGGGGCAAAATATCAACGACACAACCGAGACTGATTGCTCAGTGGGTCGCCAGAAGTTGTCGACTGCAGAAATAATAAGAGTCACTGGAGAAAGGTACGTCCAATTCTCAGCCTATTGGGACGATAATACTTGCATGCCTACGCACCCATATGGGTTTGGTCTGGGTGGTCTGTCTGACGAAGAGAACAAAGACGTTGAACTGGCTCAATTTCTTCTAACTGCAGCCGAGAGGGTAAGCTGCGAACAATACGAAGGAGCAAACAGGATCCTTTTACAATGTGAATTGAATTCATCCGCTTGTGCAACCCCAGTTCAGAAAATAGTCTACCATTTCGCTCAAGCTCTGCGAGAGAGGATCCACAAGGAAACAGGAATGGTAACAACACTCGACGGATATAAGAAAACCGAAAGGCACGAATTACTTGAGAAGATCAATTATAATTTACCGTTTATATCTACATGCTTCCGAAAGATTCCATTCTGTCAAGCAATGCAAATAGCCGGCGTACAGGCTATGATAGAGCACCTCGCGTCAGGGACCAAAATCCATCTCATCGATCTTGAAATCAGATGGGGAGTGCAATGGACGGCTCTGATGCAAGCCCTCGCGGAGCGTCGTCAAAGACCCCTTCAGCTTCTCACCATAACTGCTATTGGATTCGAAGGCAGAAACGAGTTAGAAGAGACAGGCGAGTGTTTAGCCGATTTTGCAGGATCCTTAAACTTGCCCTTCTCATTTAAAGTGGTTTTTGTGACGGACATGATCGAAATCAGGGAAGAACAATTCGAGATCAATGACGATGAAGCCGTAGCGGTGTACGCTCCCTGCGTTCTGGCGACAATGATACCAAGGCCAGAGTGCTTGGAAAACTTGATGAGCATACTGAGGAAAAAGAAACCACGCATAATGATAGTGCATGAGACGGAAGCAAACAGTAACTCGCAGTTCTTCGGGAAGCGCTTCGTGGAAGCGTTGTTCTTCTTCTCGGCTTATATTGATTGCACTGAAACATGCATGAAAGATGAGGCAGAATGCAGAGTGGCTATGGGTGCTTTATTCAGCGACAGGATAAGGAACGTTGTGGCCAGGGAAGGCAAAGAAAGGACACAGAGGCATGTGAAGGTGGATGTTTGGAGAAGGTTCTTTGCGAGGTACAGAGTGGTGGAGACAAGTTTTAGCGAATCGTCGCTGTACCAGGCAAACTTGGTGATCAAGAATTTTGCACACGGCGACTCTTGCACTCTCGGTAAAAATGGCAATAGTCTAACAGTCGGGTGGAAGGGAACCCCACTCCACTCTGTTTCTGCTTGGAAATTCCTCTGA 1719 0.4636 MGDDAALNCNGTQGGHKFAPEEAVFHEGNSLLDMKFTEEMNALPIENHEKETYSHQNRSHEPKFDDLMLEEFSFDFLLQPPQAFEETVEVNNKAVASSESVKYNDKPVPPASSILASLELLNNYKSRLRRLKGQNINDTTETDCSVGRQKLSTAEIIRVTGERYVQFSAYWDDNTCMPTHPYGFGLGGLSDEENKDVELAQFLLTAAERVSCEQYEGANRILLQCELNSSACATPVQKIVYHFAQALRERIHKETGMVTTLDGYKKTERHELLEKINYNLPFISTCFRKIPFCQAMQIAGVQAMIEHLASGTKIHLIDLEIRWGVQWTALMQALAERRQRPLQLLTITAIGFEGRNELEETGECLADFAGSLNLPFSFKVVFVTDMIEIREEQFEINDDEAVAVYAPCVLATMIPRPECLENLMSILRKKKPRIMIVHETEANSNSQFFGKRFVEALFFFSAYIDCTETCMKDEAECRVAMGALFSDRIRNVVAREGKERTQRHVKVDVWRRFFARYRVVETSFSESSLYQANLVIKNFAHGDSCTLGKNGNSLTVGWKGTPLHSVSAWKFL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2876g00004 572 ProSiteProfiles GRAS family profile. 190 570 IPR005202 -
Pral2876g00004 572 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 138 563 IPR005202 -
Pral2876g00004 572 Pfam GRAS domain family 200 570 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2876g00004 Pral-Chr2876 14271 15989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2876g00004 189 571 GRAS Transcription Factor Family AT3G03450 29.457 1.74e-45 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral2876g00004 GRAS 9.2e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2876g00004 - - gmx:100791952 602.438