Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2875g00004 ATGGCGACATCGTGTTTTCATCCACTTCGACTACGAAAGTGGAAGAGGAAAACGTTATTACCGGCGGCTTCTTCTTCTACCTCTTCTTCTTCTTCTTCTTCTTCTTCGTCGTCGTCGTCAAAGAGGCAGTTGAATTGCGATGGTGGGGAGAATTTGGAAAGGAAGAGATTCGACAGCGTGGAATCATGGTCCATGATACTGGAGTCTGAGAATTTGGAGACGTGGGAGGCTTCGAAGGAGGATCAGGAAGAATGGACCGCCGATCTTTCTCAGCTTTTTATAGGAAACAGGTTCGCTTCCGGCGCTCACAGTCGGATTTATCGCGGCATTTACAAGCAGAGAGCCGTGGCTGTGAAAATGGTTAGAATTCCGACTGAGAATGATGACAAAAGGACTTTACTGGAGCAGCAATTTAAATCCGAAGTTGCTTTACTTTCACGTCTCCTTCATCCTAATATAGTGCAGTTTATTGCAGCTTGTAAAAAACCACCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAAATCTGAGGATGTACCTGAACAAAAAAGAGCCACACTCTCTTTCAACAGAAACTATACTAAGATTAGCTCTCGACATATCTAGGGGTATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACCTCAAGTCAAATAACTTGCTTCTCAATGATGAGATGAGGGTTAAGGTTGCAGATTTTGGCACATCATGCCTTGAAACACGATGCCTGGAGAATAAAGGTAACATGGGGACATATCGTTGGATGGCCCCGGAGATGATCAAGGAAAAACCATATACTCGAAAAGTGGATGTTTATAGTTTTGGAATTGTGCTTTGGGAGCTCATGACCGCCTTACTTCCTTTCCAAGGAATGACCCCTGTGCAAGCTGCATTTGCTGTGTCTGAGAAGAACCAAAGGCCACCATTGCCGGAAAGTTGTCAGCCGGCACTTGCACATCTGATAAAGCGTTGCTGGGCGGCAAATCCCTCGAAGCGGCCGGATTTCAGTGAGATTGTGTCTGTTTTGGAAAAGTATGATGAATGTGTCAAGGAAGGCCTACCTCTCACTCATTATTCAGCCTTCGTCACTAAAAATGTCATCATTCAACGCTTAAAAGGTTGTGTGTCCATGAGTTCCTCTGTACCTGTACATGCCTGA 1170 0.447 MATSCFHPLRLRKWKRKTLLPAASSSTSSSSSSSSSSSSSKRQLNCDGGENLERKRFDSVESWSMILESENLETWEASKEDQEEWTADLSQLFIGNRFASGAHSRIYRGIYKQRAVAVKMVRIPTENDDKRTLLEQQFKSEVALLSRLLHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPHSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCLENKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELMTALLPFQGMTPVQAAFAVSEKNQRPPLPESCQPALAHLIKRCWAANPSKRPDFSEIVSVLEKYDECVKEGLPLTHYSAFVTKNVIIQRLKGCVSMSSSVPVHA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2875g00004 389 FunFam Serine/threonine-protein kinase isoform 1 82 174 - -
Pral2875g00004 389 PRINTS Tyrosine kinase catalytic domain signature 317 339 IPR001245 GO:0004672|GO:0006468
Pral2875g00004 389 PRINTS Tyrosine kinase catalytic domain signature 254 264 IPR001245 GO:0004672|GO:0006468
Pral2875g00004 389 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Pral2875g00004 389 PRINTS Tyrosine kinase catalytic domain signature 170 183 IPR001245 GO:0004672|GO:0006468
Pral2875g00004 389 PRINTS Tyrosine kinase catalytic domain signature 208 226 IPR001245 GO:0004672|GO:0006468
Pral2875g00004 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Pral2875g00004 389 Gene3D Phosphorylase Kinase; domain 1 81 174 - -
Pral2875g00004 389 MobiDBLite consensus disorder prediction 19 48 - -
Pral2875g00004 389 CDD STKc_MAP3K-like 99 346 - -
Pral2875g00004 389 ProSiteProfiles Protein kinase domain profile. 92 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2875g00004 389 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 28 349 - -
Pral2875g00004 389 MobiDBLite consensus disorder prediction 20 46 - -
Pral2875g00004 389 SUPERFAMILY Protein kinase-like (PK-like) 68 346 IPR011009 -
Pral2875g00004 389 Gene3D Transferase(Phosphotransferase) domain 1 175 368 - -
Pral2875g00004 389 SMART serkin_6 92 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2875g00004 389 Pfam Protein tyrosine and serine/threonine kinase 95 346 IPR001245 GO:0004672|GO:0006468
Pral2875g00004 389 FunFam serine/threonine-protein kinase HT1 175 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2875g00004 Pral-Chr2875 39481 44297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2875g00004 1 389 MAP Kinase Kinase Kinase AT1G62400 78.535 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral2875g00004 PK_Tyr_Ser-Thr 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2875g00004 - - mnt:21396785 654.055