Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2874g00007 ATGGCTTCTGCAGATGTTGAGTATCGTTGCTTTGTCGGTGGGCTCGCATGGGCTACCGACAACGATGCCCTTGGCCAGGCCTTTGCTCCTTTCGGCGATGTTATTGAATCGAAGATTATCAACGATCGCGAGACCGGAAGGTCCAGAGGGTTCGGATTCGTGACGTTCTCCTCAGAGCAGTCTATGAGGGATGCGATCGAAGGCATGAACGGTCAGAGCCTTGATGGTCGGAACATTACGGTGAACGAAGCTCAGTCTCGTGGAAGAGGCGGCGGCGGCGGCGGATACGGCGGTGGGAGTGGGTATAGCCGCGGTGGAGGCGGATACGGAGGCGGCGGGTACGGAGGCGGCGGACGCCGCGAGGGTGGATACTACAAGAGTGGTGGAGGATACGGCGGCGGCGGCGGTTATGGTGATCGTGGCTCTCGCTACTCTCGTGGGGGTGGTGAGTCCTATGGAAACTGGAGGGATTAA 474 0.5928 MASADVEYRCFVGGLAWATDNDALGQAFAPFGDVIESKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQSLDGRNITVNEAQSRGRGGGGGGYGGGSGYSRGGGGYGGGGYGGGGRREGGYYKSGGGYGGGGGYGDRGSRYSRGGGESYGNWRD 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2874g00007 157 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Pral2874g00007 157 MobiDBLite consensus disorder prediction 69 85 - -
Pral2874g00007 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Pral2874g00007 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Pral2874g00007 157 Gene3D - 2 103 IPR012677 -
Pral2874g00007 157 PANTHER GEO13361P1-RELATED 3 150 - -
Pral2874g00007 157 SMART rrm1_1 9 82 IPR000504 GO:0003723
Pral2874g00007 157 MobiDBLite consensus disorder prediction 69 102 - -
Pral2874g00007 157 CDD RRM2_NsCP33_like 9 84 - -
Pral2874g00007 157 MobiDBLite consensus disorder prediction 128 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2874g00007 Pral-Chr2874 41539 42569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2874g00007 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 31.646 8.23e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2874g00007 - K13195 fve:101299909 157.918