Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2874g00006 ATGGTGGATCGGCGAAGCCTAGTGTCTGTTGGGTTCTTATTCTCGTTGCTGTTTCAGTTCACATTTGAACAGATTGTGCCATTGAGTTCAAACATAGAGCAAGCTGCACTTTTTGACCTTAGATCGTCTCTGGGCTTGAGGAGCAAGGAATGGCCGAGAAAAGTCGACCCTTGCTCTCTCTGGAAGGGCATCACGTGCGAGAATGGTCGAGTCATTGGGATCAATATTTCTGGGTTTAGAAGAACCCGTCTTGGGAAGCTAAACCCGCAATTTTCAGTCCAAGCCTTAGCCAATTTTACTCTCTTGCAGTCTTTCAATGCCTCCAATTTTCTGCTTCCTGGTTCTATTCCTGACTGGTTTGGCCTACAGCTCTCATCTCTGAAAGTGCTTGATCTTCGGTCTTGCTCTGTTAATGGTGCTATTCCTCCCAGTCTAGGGAATTTAACGAACCTCACTAGTCTGTATTTATCTGATAATAGTATTACTGGGATAATCCCTGATAGTCTGGGTCAACTACTAAGCCTTTCAGTTCTTAACTTTTCGAGGAATCGTCTTTCTGGAACCATTCCAGCATCGTTTGTCTCTCTTGGGAATCTTTCCTCTATTGACATTTCCACCAATTCTTTGTCTGGCTCAATTCCTCCTGGCATTGGGGCCCTCACAAGGTTACAGTACTTGAATCTTTCCGATAACAGTTTAATGGCTTCGATACCCTCTCAGCTGGGAAATTTAAGTAGCCTGGTTGACCTTGATCTTAGTTTTAATTATTTGACCGGTGGGGTGCCTCCAGAATTAAGAGAGCTGAGGAGCTTGCGGAGAATGATACTAAGCTACAACACGCTTGATGGACCTTTGTCAGAGAACTTGTTTCCTACTTTGTCACAGTTGCAGGTTGTTGTGCTGAGACAAAACAATTTCACTGGTGATCTGCCTGCTGCACTGTGGTCTCTGCCGAGATTGAGCTATCTCGATCTGTCTGGTAACAATTTCACTGGTATGCTTCCAAATTCTAGTTCGAATCAGAACACGACTGCTGCTATGCTTAACATTTCCAATAATATGTTTTATGGAAGCCTTAATCCTAATATCAGAAGGTTCAGAGTCATTGACCTGTCAAGCAATTATTTTGAGGGCAAGATTCTAGATTTCATGCTCAATGTACCTCCAAACACCAACTGCCTCCAAAACGTTTCAAATCAGAGGACGGCTGGAGAATGTGCGTCGTTTTATGCTAAGAGGGGCCTCACTTTTGACAATTTTGGACGCCCAAATTCAACTGGACCTCCTGCGACAGAAAGCTCTCGGAAGAGCAATAGATATAAGATTATATTGGCTGGAGTCTTGGGTGGATTTGGTTTGCTTGTTATTTTGTTGTTGCTATTGTTCTTGTTCCTTCTTTGTACTCGTAAGAGGCGTAATTCAAATCAAAGAGGAAATGGTGTGGGCCCTGCTCCTCCTGGGAGCAGTCCTCCAGCTCCTGGCATGTCAATCAATTTCATAAATGTGGGAGATTCATTTACAATACAGCAGCTGCTTCAGGCTACAGGTGATTTCAATGATGCAAATCTTATCAAACATGGCCACTCTGGGGATCTCTTCAATGGTGTTTTGGAAAGTGGCATACCTGTAGTCATTAAAAGGGTTGATGCGCGTGCAACTAAAAAAGATACTTTCCTAGTGGAATTGGACTTTTTCAGTAAGATTTCTCATACTAGATTTGTTCCTCTGCTGGGTCATTGCTTAGAAAATGAGAATGAGAAGTTCCTTGTTTATAAACATATGCCAAATGGGGACTTGTCAAATAGTCTCTATTACAAGAAATCTACATCTGAAGATGGTACTTTGCAGTCATTGGACTGGATAACAAGGTTGAAAATTGCTATTGGAGCTGCGGAGGCCCTATCTTATCTTCATCATGAGTGTAATCCACCCTTTGTTCATAGAGATATTCAAGCCAGCAGTATACTTCTAGATGATAAATATGAAGTTCGGTTGGGTAGTCTAAGTGAAGTCTGCACCCAAGAAGGGGATAGTCATCAAAGCAAAATTACGAGGCTGCTAAGGTTGCCTCAGTCCTCTGATCCAGGCACATCTGGTTCATCTACATCAAATTGTGCCTATGATGTTTATTGCTTTGGTAAAATATTGCTTGAGTTGGTGACTGGGAAGATGGGAATTAGTGCGTCCAGTGATGCTGAATTTAAGGAATGGTTGGATCAGATGCTGCCGTACATTAGTATTTATGACAAGGAGCTTGTCGCGAAAATCGTGGATCCTTCTCTGGTTGTAGATGAGGATTTCTTAGAGGAAGTGTGGGCTATTGCTATTGTTGCAAGGTCTTGCCTAAATCCTAAACCTTCAAGACGACCCCCCATGCGATATGTTCTCAAGGCTTTAGAAAACCCCTTTAAAGTTGTGAGGGAAGAAGGTGCCGGTTCTTCACGGCTTAGAACAACCTCTTCTAGAGGCTCTTGGAATGCTGCTTTGTTTGGTAGTTGGCGTCAGAGTTCATCTGATGTAACGGCAATCCCAGCAGCTTCTGGTACCAAAGTGGAAGGAGGGAGTAGTTTGAAGCATTCTGGAACTACCGGCTCACAGGGTAGTGGCCACAATGGCGGTGGTTCATCATCCCGGAGGCGACATTCAAGTGAAATATTCCCAGAGCCATCTAACATACAGGACATAGAGAGGCCAGAGCAGTAA 2703 0.4351 MVDRRSLVSVGFLFSLLFQFTFEQIVPLSSNIEQAALFDLRSSLGLRSKEWPRKVDPCSLWKGITCENGRVIGINISGFRRTRLGKLNPQFSVQALANFTLLQSFNASNFLLPGSIPDWFGLQLSSLKVLDLRSCSVNGAIPPSLGNLTNLTSLYLSDNSITGIIPDSLGQLLSLSVLNFSRNRLSGTIPASFVSLGNLSSIDISTNSLSGSIPPGIGALTRLQYLNLSDNSLMASIPSQLGNLSSLVDLDLSFNYLTGGVPPELRELRSLRRMILSYNTLDGPLSENLFPTLSQLQVVVLRQNNFTGDLPAALWSLPRLSYLDLSGNNFTGMLPNSSSNQNTTAAMLNISNNMFYGSLNPNIRRFRVIDLSSNYFEGKILDFMLNVPPNTNCLQNVSNQRTAGECASFYAKRGLTFDNFGRPNSTGPPATESSRKSNRYKIILAGVLGGFGLLVILLLLLFLFLLCTRKRRNSNQRGNGVGPAPPGSSPPAPGMSINFINVGDSFTIQQLLQATGDFNDANLIKHGHSGDLFNGVLESGIPVVIKRVDARATKKDTFLVELDFFSKISHTRFVPLLGHCLENENEKFLVYKHMPNGDLSNSLYYKKSTSEDGTLQSLDWITRLKIAIGAAEALSYLHHECNPPFVHRDIQASSILLDDKYEVRLGSLSEVCTQEGDSHQSKITRLLRLPQSSDPGTSGSSTSNCAYDVYCFGKILLELVTGKMGISASSDAEFKEWLDQMLPYISIYDKELVAKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPFKVVREEGAGSSRLRTTSSRGSWNAALFGSWRQSSSDVTAIPAASGTKVEGGSSLKHSGTTGSQGSGHNGGGSSSRRRHSSEIFPEPSNIQDIERPEQ 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2874g00006 900 FunFam Putative LRR receptor-like serine/threonine-protein kinase 594 819 - -
Pral2874g00006 900 Gene3D Ribonuclease Inhibitor 189 288 IPR032675 -
Pral2874g00006 900 Gene3D Ribonuclease Inhibitor 289 387 IPR032675 -
Pral2874g00006 900 Gene3D Phosphorylase Kinase; domain 1 496 593 - -
Pral2874g00006 900 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 98 800 - -
Pral2874g00006 900 ProSiteProfiles Leucine-rich repeat profile. 150 171 IPR001611 GO:0005515
Pral2874g00006 900 MobiDBLite consensus disorder prediction 853 880 - -
Pral2874g00006 900 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515
Pral2874g00006 900 ProSiteProfiles Protein kinase domain profile. 518 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2874g00006 900 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Pral2874g00006 900 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 30 189 - -
Pral2874g00006 900 Gene3D Transferase(Phosphotransferase) domain 1 594 811 - -
Pral2874g00006 900 SMART LRR_typ_2 220 244 IPR003591 -
Pral2874g00006 900 SMART LRR_typ_2 172 196 IPR003591 -
Pral2874g00006 900 SMART LRR_typ_2 317 340 IPR003591 -
Pral2874g00006 900 SMART LRR_typ_2 148 171 IPR003591 -
Pral2874g00006 900 SMART LRR_typ_2 268 292 IPR003591 -
Pral2874g00006 900 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 288 - -
Pral2874g00006 900 Pfam Leucine rich repeat 149 209 IPR001611 GO:0005515
Pral2874g00006 900 Pfam Leucine rich repeat 286 330 IPR001611 GO:0005515
Pral2874g00006 900 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Pral2874g00006 900 Pfam Protein tyrosine and serine/threonine kinase 524 796 IPR001245 GO:0004672|GO:0006468
Pral2874g00006 900 MobiDBLite consensus disorder prediction 844 900 - -
Pral2874g00006 900 SUPERFAMILY Protein kinase-like (PK-like) 496 799 IPR011009 -
Pral2874g00006 900 FunFam Predicted protein 488 593 - -
Pral2874g00006 900 SUPERFAMILY RNI-like 94 398 - -
Pral2874g00006 900 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 292 422 - -
Pral2874g00006 900 MobiDBLite consensus disorder prediction 474 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2874g00006 Pral-Chr2874 17230 23136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2874g00006 33 691 Miscellaneous Gene Families AT2G16250 57.594 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Pral2874g00006 PK_Tyr_Ser-Thr 8.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2874g00006 - - qsa:O6P43_011595 1232.62